Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_M06
         (897 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0080 + 587674-588510                                             27   2.8  
06_03_1172 - 28147957-28148274,28149362-28149877                       29   3.8  
02_05_0686 - 30900748-30902167,30903442-30904742                       25   4.3  
01_06_1179 - 35161229-35162368                                         24   7.7  
10_08_0638 - 19503580-19503990                                         28   8.8  
05_01_0267 + 2050854-2051682,2051864-2051921,2052518-2052608           28   8.8  
02_05_0962 + 33114226-33114684,33114806-33114853,33115166-331152...    28   8.8  

>07_01_0080 + 587674-588510
          Length = 278

 Score = 27.1 bits (57), Expect(2) = 2.8
 Identities = 11/28 (39%), Positives = 11/28 (39%)
 Frame = -2

Query: 503 GXPKKXXPXPXGGGXFFXXKKXPPPPPP 420
           G      P   GG   F     PPPPPP
Sbjct: 72  GAASTSTPPRLGGDGMFRRPPPPPPPPP 99



 Score = 21.4 bits (43), Expect(2) = 2.8
 Identities = 8/20 (40%), Positives = 8/20 (40%)
 Frame = -2

Query: 437 PPPPPPXXKKKXXPXXXXXF 378
           PPPPPP       P     F
Sbjct: 104 PPPPPPPPPPPPPPPPPPLF 123


>06_03_1172 - 28147957-28148274,28149362-28149877
          Length = 277

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 13/32 (40%), Positives = 13/32 (40%)
 Frame = -2

Query: 515 GXGGGXPKKXXPXPXGGGXFFXXKKXPPPPPP 420
           G GGG P    P P     F       PPPPP
Sbjct: 5   GAGGGAPPPPPPSPPSVYPFLPPATFIPPPPP 36


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 25.4 bits (53), Expect(2) = 4.3
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -2

Query: 437 PPPPPPXXKKKXXP 396
           PPPPPP  KK   P
Sbjct: 365 PPPPPPGGKKGGPP 378



 Score = 22.2 bits (45), Expect(2) = 4.3
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -2

Query: 446 KKXPPPPPP 420
           K  PPPPPP
Sbjct: 333 KAAPPPPPP 341


>01_06_1179 - 35161229-35162368
          Length = 379

 Score = 24.2 bits (50), Expect(2) = 7.7
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 443 KXPPPPPPXXKKKXXP 396
           K PPPPPP   +   P
Sbjct: 287 KPPPPPPPAAARSPAP 302



 Score = 22.6 bits (46), Expect(2) = 7.7
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -2

Query: 446 KKXPPPPPP 420
           K  PPPPPP
Sbjct: 285 KSKPPPPPP 293


>10_08_0638 - 19503580-19503990
          Length = 136

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 13/40 (32%), Positives = 13/40 (32%)
 Frame = -2

Query: 515 GXGGGXPKKXXPXPXGGGXFFXXKKXPPPPPPXXKKKXXP 396
           G G   P             F  K  PPPPPP  K    P
Sbjct: 88  GIGRSFPASAFADETAAAAAFLRKPTPPPPPPRKKPPPQP 127


>05_01_0267 + 2050854-2051682,2051864-2051921,2052518-2052608
          Length = 325

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -2

Query: 437 PPPPPPXXKKKXXP 396
           PPPPPP  KKK  P
Sbjct: 206 PPPPPPQPKKKAPP 219


>02_05_0962 +
           33114226-33114684,33114806-33114853,33115166-33115286,
           33115760-33116008,33116149-33116302,33116493-33116985,
           33117524-33117596,33118285-33118343
          Length = 551

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +1

Query: 421 GGGGGGXFXXXKKXPPP 471
           GGGGGG F   +  PPP
Sbjct: 54  GGGGGGGFLRLRSAPPP 70


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,231,595
Number of Sequences: 37544
Number of extensions: 207420
Number of successful extensions: 5468
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2623
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)