Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_M06
         (897 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical pr...    31   0.85 
Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical pr...    31   0.85 
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    29   4.5  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    29   4.5  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    29   4.5  

>Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = -2

Query: 515 GXGGGXPKKXXPXPXGGGXFFXXKKXPPPPPP 420
           G GGG          GGG +      PPPPPP
Sbjct: 276 GGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPP 307



 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/32 (40%), Positives = 13/32 (40%)
 Frame = -2

Query: 515 GXGGGXPKKXXPXPXGGGXFFXXKKXPPPPPP 420
           G GGG          GGG        PPPPPP
Sbjct: 277 GGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPP 308


>Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = -2

Query: 515 GXGGGXPKKXXPXPXGGGXFFXXKKXPPPPPP 420
           G GGG          GGG +      PPPPPP
Sbjct: 276 GGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPP 307



 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/32 (40%), Positives = 13/32 (40%)
 Frame = -2

Query: 515 GXGGGXPKKXXPXPXGGGXFFXXKKXPPPPPP 420
           G GGG          GGG        PPPPPP
Sbjct: 277 GGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPP 308


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 14/29 (48%), Positives = 14/29 (48%)
 Frame = -2

Query: 506 GGXPKKXXPXPXGGGXFFXXKKXPPPPPP 420
           GG P    P P GG      K  PPPPPP
Sbjct: 766 GGCPPPPPPPPPGG-----FKGGPPPPPP 789



 Score = 25.0 bits (52), Expect(2) = 4.8
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -1

Query: 483 PXPXGGGXFFXXXKXPPPPPP 421
           P P GG         PPPPPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPP 765



 Score = 22.2 bits (45), Expect(2) = 4.8
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -1

Query: 438 PPPPPPXXKKKXXP 397
           PPPPPP    K  P
Sbjct: 771 PPPPPPPGGFKGGP 784


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 14/29 (48%), Positives = 14/29 (48%)
 Frame = -2

Query: 506 GGXPKKXXPXPXGGGXFFXXKKXPPPPPP 420
           GG P    P P GG      K  PPPPPP
Sbjct: 766 GGCPPPPPPPPPGG-----FKGGPPPPPP 789



 Score = 25.0 bits (52), Expect(2) = 4.8
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -1

Query: 483 PXPXGGGXFFXXXKXPPPPPP 421
           P P GG         PPPPPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPP 765



 Score = 22.2 bits (45), Expect(2) = 4.8
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -1

Query: 438 PPPPPPXXKKKXXP 397
           PPPPPP    K  P
Sbjct: 771 PPPPPPPGGFKGGP 784


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 14/29 (48%), Positives = 14/29 (48%)
 Frame = -2

Query: 506 GGXPKKXXPXPXGGGXFFXXKKXPPPPPP 420
           GG P    P P GG      K  PPPPPP
Sbjct: 349 GGCPPPPPPPPPGG-----FKGGPPPPPP 372



 Score = 25.0 bits (52), Expect(2) = 4.9
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -1

Query: 483 PXPXGGGXFFXXXKXPPPPPP 421
           P P GG         PPPPPP
Sbjct: 328 PPPPGGLPPISGGPPPPPPPP 348



 Score = 22.2 bits (45), Expect(2) = 4.9
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -1

Query: 438 PPPPPPXXKKKXXP 397
           PPPPPP    K  P
Sbjct: 354 PPPPPPPGGFKGGP 367


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,123,161
Number of Sequences: 27780
Number of extensions: 107084
Number of successful extensions: 1868
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)