Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_M05
         (951 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_02_0032 + 10775031-10775520,10775661-10776246,10776333-107769...    29   5.4  
07_03_1136 + 24218601-24218734,24218769-24219906                       28   9.5  
06_02_0028 + 10755164-10755668,10755740-10756283,10756372-10758247     28   9.5  

>06_02_0032 +
           10775031-10775520,10775661-10776246,10776333-10776973,
           10777270-10777973
          Length = 806

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 148 IVIMSIGLTCFGLALGYIAYMRQKYESMGYYSAI 249
           ++ ++I L   GL L Y+A  R + ES GY+ A+
Sbjct: 752 VMNITIVLNLLGLLLAYMAGSRMRLESSGYFIAL 785


>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 18/43 (41%), Positives = 18/43 (41%)
 Frame = -1

Query: 828 PPXGGXXXPXXPXPXXXGGXXXXGGGEXGRGPKXXNPLXPGGG 700
           PP GG      P P   GG    GGG  G GP    P   GGG
Sbjct: 91  PPGGGGA----PGPLGGGGARPPGGG-GGGGPPSLPPGAGGGG 128


>06_02_0028 + 10755164-10755668,10755740-10756283,10756372-10758247
          Length = 974

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 145  NIVIMSIGLTCFGLALGYIAYMRQKYESMGYY 240
            N++ ++I L   GL L Y+A  R + +S GY+
Sbjct: 908  NVMNITIVLDLLGLLLAYMAGSRMRLQSSGYF 939


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,663,674
Number of Sequences: 37544
Number of extensions: 289023
Number of successful extensions: 543
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2741249160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)