Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_M04
         (892 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF036706-10|AAM97948.1|  633|Caenorhabditis elegans Hypothetical...   157   8e-39
AF036706-9|AAK39281.1|  681|Caenorhabditis elegans Hypothetical ...   157   8e-39

>AF036706-10|AAM97948.1|  633|Caenorhabditis elegans Hypothetical
           protein T07A9.9b protein.
          Length = 633

 Score =  157 bits (382), Expect = 8e-39
 Identities = 90/233 (38%), Positives = 121/233 (51%), Gaps = 3/233 (1%)
 Frame = +3

Query: 135 SLYNFKKIAVVPTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHDR 314
           S+YNFK+I  VP A++  D++LSKTQRKTPTVVH+ Y I RIR FY RK+K+ QQ  HD+
Sbjct: 3   SMYNFKRITCVPNAQELKDVVLSKTQRKTPTVVHRQYSIGRIRAFYARKIKFLQQTLHDK 62

Query: 315 LSRIIQEFPKLDDVHPFYADLMNVLYDKGSLXTWTRTAEHXQTSY*QCCKDYVRLVKYXD 494
           L++II EFPK++++HPFY+DLMN+LYD+             +       ++YVRL+KY D
Sbjct: 63  LTQIITEFPKMEEIHPFYSDLMNILYDRDHYKIALGQMNTARHLIDGIAREYVRLMKYAD 122

Query: 495 SLYPCNS*NVXLXVXXALS*NXXGPIXPSWNXXVXI-XHVYRR*XPTPGR*SSV--GXPT 665
           SLY C    +                  S+     +  H+ R     P   + +  G P 
Sbjct: 123 SLYRC---KMLKRAALGRMVKLLKRQKSSFEYLEQVRQHLSRLPSIDPATRTLILCGFPN 179

Query: 666 FGKPVXXXXXXXXXXEMXPFAFTXKXLDXGPPDYXXLGMGGEKPPGXPDSPWE 824
            GK            E+ P+AFT K L  G  DY  L       PG  D P E
Sbjct: 180 VGKSSFINNVTRADVEVQPYAFTTKALYVGHLDYRFLRWQVIDTPGILDQPLE 232



 Score = 64.9 bits (151), Expect = 7e-11
 Identities = 32/66 (48%), Positives = 42/66 (63%)
 Frame = +2

Query: 509 QQLKRAALGXXGPIMKXAXAYXTFLEXVRXHLXRLPAIDXYXRTIIICXXPNVRKTSFIX 688
           + LKRAALG    ++K   +   +LE VR HL RLP+ID   RT+I+C  PNV K+SFI 
Sbjct: 128 KMLKRAALGRMVKLLKRQKSSFEYLEQVRQHLSRLPSIDPATRTLILCGFPNVGKSSFIN 187

Query: 689 KKTXSD 706
             T +D
Sbjct: 188 NVTRAD 193


>AF036706-9|AAK39281.1|  681|Caenorhabditis elegans Hypothetical
           protein T07A9.9a protein.
          Length = 681

 Score =  157 bits (382), Expect = 8e-39
 Identities = 90/233 (38%), Positives = 121/233 (51%), Gaps = 3/233 (1%)
 Frame = +3

Query: 135 SLYNFKKIAVVPTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHDR 314
           S+YNFK+I  VP A++  D++LSKTQRKTPTVVH+ Y I RIR FY RK+K+ QQ  HD+
Sbjct: 3   SMYNFKRITCVPNAQELKDVVLSKTQRKTPTVVHRQYSIGRIRAFYARKIKFLQQTLHDK 62

Query: 315 LSRIIQEFPKLDDVHPFYADLMNVLYDKGSLXTWTRTAEHXQTSY*QCCKDYVRLVKYXD 494
           L++II EFPK++++HPFY+DLMN+LYD+             +       ++YVRL+KY D
Sbjct: 63  LTQIITEFPKMEEIHPFYSDLMNILYDRDHYKIALGQMNTARHLIDGIAREYVRLMKYAD 122

Query: 495 SLYPCNS*NVXLXVXXALS*NXXGPIXPSWNXXVXI-XHVYRR*XPTPGR*SSV--GXPT 665
           SLY C    +                  S+     +  H+ R     P   + +  G P 
Sbjct: 123 SLYRC---KMLKRAALGRMVKLLKRQKSSFEYLEQVRQHLSRLPSIDPATRTLILCGFPN 179

Query: 666 FGKPVXXXXXXXXXXEMXPFAFTXKXLDXGPPDYXXLGMGGEKPPGXPDSPWE 824
            GK            E+ P+AFT K L  G  DY  L       PG  D P E
Sbjct: 180 VGKSSFINNVTRADVEVQPYAFTTKALYVGHLDYRFLRWQVIDTPGILDQPLE 232



 Score = 64.9 bits (151), Expect = 7e-11
 Identities = 32/66 (48%), Positives = 42/66 (63%)
 Frame = +2

Query: 509 QQLKRAALGXXGPIMKXAXAYXTFLEXVRXHLXRLPAIDXYXRTIIICXXPNVRKTSFIX 688
           + LKRAALG    ++K   +   +LE VR HL RLP+ID   RT+I+C  PNV K+SFI 
Sbjct: 128 KMLKRAALGRMVKLLKRQKSSFEYLEQVRQHLSRLPSIDPATRTLILCGFPNVGKSSFIN 187

Query: 689 KKTXSD 706
             T +D
Sbjct: 188 NVTRAD 193


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,003,582
Number of Sequences: 27780
Number of extensions: 337032
Number of successful extensions: 615
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)