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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_L22
         (900 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53340-6|AAA96210.1|  305|Caenorhabditis elegans Atp synthase b ...    86   4e-17
Z46242-8|CAA86329.1|  301|Caenorhabditis elegans Hypothetical pr...    82   5e-16
AL022716-5|CAB97232.1|  291|Caenorhabditis elegans Hypothetical ...    34   0.16 
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen...    32   0.49 
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen...    32   0.49 
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ...    32   0.49 
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ...    32   0.49 
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll...    32   0.49 
Z68215-7|CAA92453.1|  289|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AC024811-5|AAF60775.1|  285|Caenorhabditis elegans Collagen prot...    31   1.1  
Z82268-5|CAB05195.1|  304|Caenorhabditis elegans Hypothetical pr...    31   1.5  
Z54237-4|CAN86899.1|  297|Caenorhabditis elegans Hypothetical pr...    31   1.5  
Z75552-4|CAA99942.1|  624|Caenorhabditis elegans Hypothetical pr...    30   2.6  
U40060-1|AAA81141.1|  341|Caenorhabditis elegans Collagen protei...    30   2.6  
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p...    29   4.5  
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.      29   4.5  
Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical pr...    29   6.0  
Z70286-1|CAA94294.2|  194|Caenorhabditis elegans Hypothetical pr...    28   7.9  
U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein ...    28   7.9  
U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein.      28   7.9  
U23179-7|AAC46721.1|  782|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>U53340-6|AAA96210.1|  305|Caenorhabditis elegans Atp synthase b
           homolog protein 2 protein.
          Length = 305

 Score = 85.8 bits (203), Expect = 4e-17
 Identities = 62/201 (30%), Positives = 100/201 (49%), Gaps = 5/201 (2%)
 Frame = +3

Query: 249 PGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMVY 428
           P K RL  +P+ WF  F   TGV+GPY F  GL  +L +KE++V E + +  +  ++   
Sbjct: 104 PPKSRLLMMPDSWFTPFQKVTGVSGPYLFFGGLFAFLVNKELWVFEEQGHMTVGWILFYL 163

Query: 429 VAHVKFGPKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQG----QELL 596
           +     G K+   L    +   N + +G  Q  + L++A+E +KT   + +     +E  
Sbjct: 164 LVTRTAGYKIDQGLYNGYQERVN-FFKGLIQ--EDLKEAVEFKKTSAKQTESLNSIKESY 220

Query: 597 IQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLEKSNVERRLAXKHMVDWIVSNVTKA 776
             A KE++ LQLEA YR+ +    TE+KRR+DY  E    + R+  + ++  I S V K 
Sbjct: 221 PTALKESMALQLEATYRKNVQSVATELKRRIDYLKETEESKARVEREQLLKLINSEVDKE 280

Query: 777 ITPXXXK-QALDRCIXDLASL 836
            +    K + L   I  L  L
Sbjct: 281 FSDRSFKDKYLQNAIQQLKGL 301


>Z46242-8|CAA86329.1|  301|Caenorhabditis elegans Hypothetical
           protein F35G12.10 protein.
          Length = 301

 Score = 82.2 bits (194), Expect = 5e-16
 Identities = 57/202 (28%), Positives = 101/202 (50%), Gaps = 5/202 (2%)
 Frame = +3

Query: 249 PGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMVY 428
           P K RL  +P+ WF  F   TG +GPY F  GL  +L +KE++V E + +  +  ++   
Sbjct: 102 PPKTRLLMMPDSWFTAFQKVTGTSGPYLFFGGLFAFLVNKELWVFEEQGHMTVGWILFYL 161

Query: 429 VAHVKFGPKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWR----AQGQELL 596
           +     G K+ A L K+ +     + +G  Q  + L++A++  KT   +    A  +E +
Sbjct: 162 LVSRTAGYKIDAGLYKDYQERVG-FFKGLIQ--EDLKEAVDFRKTSAAQTASFAALKEGM 218

Query: 597 IQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLEKSNVERRLAXKHMVDWIVSNVTKA 776
             + K+++ LQLEAAYR+ +     E+KRR++Y  E    + R     ++  I  +V K 
Sbjct: 219 PTSLKDSMQLQLEAAYRKNVQTISNEIKRRIEYLKETEETKARFERDQLLKLINDSVEKQ 278

Query: 777 ITPXXXKQA-LDRCIXDLASLA 839
           ++    ++  L   I  L  +A
Sbjct: 279 VSQKDFQEKFLQNAIQQLKGIA 300


>AL022716-5|CAB97232.1|  291|Caenorhabditis elegans Hypothetical
           protein C24F3.6 protein.
          Length = 291

 Score = 33.9 bits (74), Expect = 0.16
 Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
 Frame = +2

Query: 557 EDGAVARAGTGAP----HPGQEGERAPAARGRLQGEAHVRLHRGEAAS-GLPAREVERGA 721
           E+G       GAP     PGQ G+R PA      G    +  +G +   G P R+ + G 
Sbjct: 198 ENGNNGEPQPGAPGEPGQPGQPGQRGPAGEPGKDGSPGGQGEKGASGEPGQPGRDGQPGH 257

Query: 722 PSRPXTHGR 748
           P +P   GR
Sbjct: 258 PGQPGKDGR 266


>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
            protein.
          Length = 1759

 Score = 32.3 bits (70), Expect = 0.49
 Identities = 23/66 (34%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
 Frame = +2

Query: 557  EDGAVARAGT--GAPHPGQEGERAPAARGRLQGEAHVRLHRGEAASGLPAREVERGAPSR 730
            E G  AR G    A  PGQ G R P     L G    +   G    G P +  E+G P  
Sbjct: 1026 EAGPAARDGQKGDAGLPGQPGLRGPQGPSGLPGVPGFKGETGLPGYGQPGQPGEKGLPGI 1085

Query: 731  PXTHGR 748
            P   GR
Sbjct: 1086 PGKAGR 1091



 Score = 29.1 bits (62), Expect = 4.5
 Identities = 19/50 (38%), Positives = 25/50 (50%)
 Frame = +2

Query: 599 PGQEGERAPAARGRLQGEAHVRLHRGEAASGLPAREVERGAPSRPXTHGR 748
           PG +G  AP  +G   G   VR   G++ +GLP    +RGAP      GR
Sbjct: 469 PGLDG--APGRKGE-NGLPGVRGPPGDSLNGLPGAPGQRGAPGPNGYDGR 515


>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
            protein.
          Length = 1758

 Score = 32.3 bits (70), Expect = 0.49
 Identities = 23/66 (34%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
 Frame = +2

Query: 557  EDGAVARAGT--GAPHPGQEGERAPAARGRLQGEAHVRLHRGEAASGLPAREVERGAPSR 730
            E G  AR G    A  PGQ G R P     L G    +   G    G P +  E+G P  
Sbjct: 1025 EAGPAARDGQKGDAGLPGQPGLRGPQGPSGLPGVPGFKGETGLPGYGQPGQPGEKGLPGI 1084

Query: 731  PXTHGR 748
            P   GR
Sbjct: 1085 PGKAGR 1090



 Score = 29.1 bits (62), Expect = 4.5
 Identities = 19/50 (38%), Positives = 25/50 (50%)
 Frame = +2

Query: 599 PGQEGERAPAARGRLQGEAHVRLHRGEAASGLPAREVERGAPSRPXTHGR 748
           PG +G  AP  +G   G   VR   G++ +GLP    +RGAP      GR
Sbjct: 468 PGLDG--APGRKGE-NGLPGVRGPPGDSLNGLPGAPGQRGAPGPNGYDGR 514


>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
            isoform a protein.
          Length = 1758

 Score = 32.3 bits (70), Expect = 0.49
 Identities = 23/66 (34%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
 Frame = +2

Query: 557  EDGAVARAGT--GAPHPGQEGERAPAARGRLQGEAHVRLHRGEAASGLPAREVERGAPSR 730
            E G  AR G    A  PGQ G R P     L G    +   G    G P +  E+G P  
Sbjct: 1025 EAGPAARDGQKGDAGLPGQPGLRGPQGPSGLPGVPGFKGETGLPGYGQPGQPGEKGLPGI 1084

Query: 731  PXTHGR 748
            P   GR
Sbjct: 1085 PGKAGR 1090



 Score = 29.1 bits (62), Expect = 4.5
 Identities = 19/50 (38%), Positives = 25/50 (50%)
 Frame = +2

Query: 599 PGQEGERAPAARGRLQGEAHVRLHRGEAASGLPAREVERGAPSRPXTHGR 748
           PG +G  AP  +G   G   VR   G++ +GLP    +RGAP      GR
Sbjct: 468 PGLDG--APGRKGE-NGLPGVRGPPGDSLNGLPGAPGQRGAPGPNGYDGR 514


>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
            isoform b protein.
          Length = 1759

 Score = 32.3 bits (70), Expect = 0.49
 Identities = 23/66 (34%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
 Frame = +2

Query: 557  EDGAVARAGT--GAPHPGQEGERAPAARGRLQGEAHVRLHRGEAASGLPAREVERGAPSR 730
            E G  AR G    A  PGQ G R P     L G    +   G    G P +  E+G P  
Sbjct: 1026 EAGPAARDGQKGDAGLPGQPGLRGPQGPSGLPGVPGFKGETGLPGYGQPGQPGEKGLPGI 1085

Query: 731  PXTHGR 748
            P   GR
Sbjct: 1086 PGKAGR 1091



 Score = 29.1 bits (62), Expect = 4.5
 Identities = 19/50 (38%), Positives = 25/50 (50%)
 Frame = +2

Query: 599 PGQEGERAPAARGRLQGEAHVRLHRGEAASGLPAREVERGAPSRPXTHGR 748
           PG +G  AP  +G   G   VR   G++ +GLP    +RGAP      GR
Sbjct: 469 PGLDG--APGRKGE-NGLPGVRGPPGDSLNGLPGAPGQRGAPGPNGYDGR 515


>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) collagen
            protein.
          Length = 1795

 Score = 32.3 bits (70), Expect = 0.49
 Identities = 23/66 (34%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
 Frame = +2

Query: 557  EDGAVARAGT--GAPHPGQEGERAPAARGRLQGEAHVRLHRGEAASGLPAREVERGAPSR 730
            E G  AR G    A  PGQ G R P     L G    +   G    G P +  E+G P  
Sbjct: 1062 EAGPAARDGQKGDAGLPGQPGLRGPQGPSGLPGVPGFKGETGLPGYGQPGQPGEKGLPGI 1121

Query: 731  PXTHGR 748
            P   GR
Sbjct: 1122 PGKAGR 1127



 Score = 29.1 bits (62), Expect = 4.5
 Identities = 19/50 (38%), Positives = 25/50 (50%)
 Frame = +2

Query: 599 PGQEGERAPAARGRLQGEAHVRLHRGEAASGLPAREVERGAPSRPXTHGR 748
           PG +G  AP  +G   G   VR   G++ +GLP    +RGAP      GR
Sbjct: 505 PGLDG--APGRKGE-NGLPGVRGPPGDSLNGLPGAPGQRGAPGPNGYDGR 551


>Z68215-7|CAA92453.1|  289|Caenorhabditis elegans Hypothetical
           protein C53B4.5 protein.
          Length = 289

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 25/79 (31%), Positives = 33/79 (41%)
 Frame = +2

Query: 539 GRN*GREDGAVARAGTGAPHPGQEGERAPAARGRLQGEAHVRLHRGEAASGLPAREVERG 718
           GRN   + G+    G     PGQ G R PA +    G       +G  A+G P +    G
Sbjct: 198 GRNGEPQPGSPGEPG----RPGQPGSRGPAGQPGKDGAQGGPGEKG--ANGEPGQPGRDG 251

Query: 719 APSRPXTHGRLDSEQRDQG 775
            P RP   GR D    ++G
Sbjct: 252 QPGRPGQPGR-DGHPGEKG 269


>AC024811-5|AAF60775.1|  285|Caenorhabditis elegans Collagen protein
           48 protein.
          Length = 285

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 27/71 (38%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
 Frame = +2

Query: 539 GRN*GREDGAVARAGTGAPH--PGQEGERAPAARGRLQGEAHVRLHRGEAASGLPAREVE 712
           GRN   EDGA    G   P   PGQ G+  P  RG   GE    L  G+A  G       
Sbjct: 164 GRN--GEDGAPGPQGPSGPPGPPGQPGQ--PGQRGP-PGEPGALLPGGDAPPGPSGPPGR 218

Query: 713 RGAPSRPXTHG 745
            GAP +P   G
Sbjct: 219 PGAPGQPGKAG 229


>Z82268-5|CAB05195.1|  304|Caenorhabditis elegans Hypothetical
           protein F52B11.4 protein.
          Length = 304

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = +2

Query: 587 GAPH-PGQEGER-APAARGRLQGEAHVRLHRGEAASGLPAREVERGAPSRPXTHGRLDS 757
           GAP  PG +G+  AP A G+  G         + ASG P    + GAP +P    + +S
Sbjct: 159 GAPGAPGPQGDAGAPGAPGQGSGAGAPGPAGPKGASGAPGNPGQAGAPGQPGADAQSES 217


>Z54237-4|CAN86899.1|  297|Caenorhabditis elegans Hypothetical
           protein T11B7.3a protein.
          Length = 297

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
 Frame = +2

Query: 557 EDGAVARAGT-GAPHPGQEGERAPAAR-GR--LQGEAHVRLHRGEAAS-GLPAREVERGA 721
           +DGA    G  G    GQ G   P  R G+  + GE   +   GE  S G+P     RGA
Sbjct: 195 QDGAPGHPGADGQRQRGQPGPPGPPGRPGKVGINGEPGQKGIDGENGSEGIPGVPGPRGA 254

Query: 722 PSRPXTHG 745
           P +P T G
Sbjct: 255 PGQPGTIG 262


>Z75552-4|CAA99942.1|  624|Caenorhabditis elegans Hypothetical
           protein W04D2.4 protein.
          Length = 624

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 19/71 (26%), Positives = 30/71 (42%)
 Frame = -1

Query: 579 ARATAPSSLPQLRPPVLSRFGSDLRSIRSRSLQLPCPTKRPTLVRISRELHTP*PTVTVR 400
           +R   P S+      ++ + G +   +  RS       ++PT   I+ + H P P V V 
Sbjct: 264 SREGIPKSIEVWEEELIDKVGIEWPPVSMRSPHRFTEPRKPTTTEIAIQEHWPRPRVFVG 323

Query: 399 SNIRAPLHRFP 367
            N R  L  FP
Sbjct: 324 KNRRDHLMAFP 334


>U40060-1|AAA81141.1|  341|Caenorhabditis elegans Collagen protein
           172, isoform a protein.
          Length = 341

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +2

Query: 584 TGAP-HPGQEGERAPAARGRLQGEAHVRLHRGEAASGLPAREVERGAPSRPXTHG 745
           TG P  PGQ+G   P     LQG+      +GE   G+P  +   G P RP   G
Sbjct: 202 TGPPGFPGQKGPNGPRGSPGLQGQDG---KKGE--QGMPGPQGPTGRPGRPGPKG 251


>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
           protein C02F4.1 protein.
          Length = 1781

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 12/50 (24%), Positives = 23/50 (46%)
 Frame = -2

Query: 176 LVLCTLSVCSHLNAKPRATTLFIVYFISYFQNAKIAXVLSTLQHQILRDS 27
           +++  L +C      P+A  +F VY   +   +    +L  L H ++ DS
Sbjct: 667 VIVAVLRICEEPRHYPQAAKIFEVYLKRFSFTSAALKILKCLNHYVISDS 716


>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical
           protein C02F4.1 protein.
          Length = 1781

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 12/50 (24%), Positives = 23/50 (46%)
 Frame = -2

Query: 176 LVLCTLSVCSHLNAKPRATTLFIVYFISYFQNAKIAXVLSTLQHQILRDS 27
           +++  L +C      P+A  +F VY   +   +    +L  L H ++ DS
Sbjct: 667 VIVAVLRICEEPRHYPQAAKIFEVYLKRFSFTSAALKILKCLNHYVISDS 716


>Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical
           protein K02B12.5 protein.
          Length = 1204

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
 Frame = +3

Query: 465 WLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQ----WRAQGQELLIQAKKENVLLQL 632
           W DK  E    +W +   +T    E  I+ E  E     W+   +++L + K+EN LL+L
Sbjct: 447 WSDKRNEENAIKWKQ---ETDNIPEVVIKNEDDETDVLYWKLSDEDVLERCKEENELLKL 503

Query: 633 EAAYRERL 656
           +     +L
Sbjct: 504 DLLTEHQL 511


>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
          Length = 1781

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 12/50 (24%), Positives = 23/50 (46%)
 Frame = -2

Query: 176 LVLCTLSVCSHLNAKPRATTLFIVYFISYFQNAKIAXVLSTLQHQILRDS 27
           +++  L +C      P+A  +F VY   +   +    +L  L H ++ DS
Sbjct: 667 VIVAVLRICEEPRHYPQAAKIFEVYLKRFSFTSAALKILKCLNHYVISDS 716


>Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical
           protein F28D9.1 protein.
          Length = 601

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 23/75 (30%), Positives = 29/75 (38%)
 Frame = -1

Query: 591 APVPARATAPSSLPQLRPPVLSRFGSDLRSIRSRSLQLPCPTKRPTLVRISRELHTP*PT 412
           +P P R  +PS  PQ      S  GS  RS R R      P +R +  R         P+
Sbjct: 448 SPAPRRRRSPSKSPQAPRRRRSPSGSKSRSPRRRRSPAAAPRRRQSPQRRRSPRRRRSPS 507

Query: 411 VTVRSNIRAPLHRFP 367
            + RS    P  R P
Sbjct: 508 SSSRSRSPPPPPRRP 522


>Z70286-1|CAA94294.2|  194|Caenorhabditis elegans Hypothetical
           protein K08C7.4 protein.
          Length = 194

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = +2

Query: 518 PNRESTGGRN*GREDG--AVARAGTGAPHPGQEGERAPAARGRLQGEA 655
           P R + G R+  +E G  +V +    A    ++ ERAP+ARGR Q  A
Sbjct: 87  PRRSTRGKRSYDQETGGRSVRKVVKKAKEVNKKPERAPSARGRGQKPA 134


>U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein 502
           protein.
          Length = 1173

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 25/90 (27%), Positives = 42/90 (46%)
 Frame = +3

Query: 462 AWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAA 641
           A + ++ E  +   NE   Q  KAL++  E    +Q  A+  +   + K +    QLE A
Sbjct: 571 AEIKRDYELLQTRENEKSVQLKKALDERKENGAYQQSVAKATDAEWERKMQFYEKQLEHA 630

Query: 642 YRERLMYAYTEVKRRLDYQLEKSNVERRLA 731
             ER      E ++R   + ++S V R+LA
Sbjct: 631 NDER----KREEQKRTAAEFDQSRVARKLA 656


>U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein.
          Length = 1173

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 25/90 (27%), Positives = 42/90 (46%)
 Frame = +3

Query: 462 AWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAA 641
           A + ++ E  +   NE   Q  KAL++  E    +Q  A+  +   + K +    QLE A
Sbjct: 571 AEIKRDYELLQTRENEKSVQLKKALDERKENGAYQQSVAKATDAEWERKMQFYEKQLEHA 630

Query: 642 YRERLMYAYTEVKRRLDYQLEKSNVERRLA 731
             ER      E ++R   + ++S V R+LA
Sbjct: 631 NDER----KREEQKRTAAEFDQSRVARKLA 656


>U23179-7|AAC46721.1|  782|Caenorhabditis elegans Hypothetical
           protein C27D6.1 protein.
          Length = 782

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
 Frame = +3

Query: 474 KEVEATENEWNEGRNQTVKALEDA-IEGEKT----EQWRAQGQELLIQAKK 611
           KE+EA   +W +   +  K L +  +E  +T    E+W+ + QE+ IQ K+
Sbjct: 250 KEIEAEAEKWKDRATRNSKRLPELELELAETVQAKEEWQVKSQEMEIQNKQ 300


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,802,454
Number of Sequences: 27780
Number of extensions: 393443
Number of successful extensions: 1474
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1468
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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