Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_L17
         (895 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL451046-4|CAH70899.1|  128|Homo sapiens protein ( Human DNA seq...    31   4.3  

>AL451046-4|CAH70899.1|  128|Homo sapiens protein ( Human DNA
           sequence from clone RP11-174C7 on chromosome 6 Contains
           a ubiquitin-like 1 (sentrin) (UBL1) pseudogene, a novel
           pseudogene, a ).
          Length = 128

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 12/39 (30%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = -3

Query: 332 ITLRKHIICIVSF-TVFDFFITIYCLITAISELNAFLPF 219
           + L+K ++C++ F TV+   +++ C++  + ELN   PF
Sbjct: 12  VVLQKFLLCVILFYTVYYVSLSMGCVMFEVHELNVLAPF 50


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,645,326
Number of Sequences: 237096
Number of extensions: 1898966
Number of successful extensions: 7242
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 7150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7242
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)