Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_L17
         (895 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98877-8|CAB63404.3|  475|Caenorhabditis elegans Hypothetical pr...    34   0.16 
U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily ass...    31   1.1  
AC006830-7|AAK68613.2|  479|Caenorhabditis elegans Hypothetical ...    31   1.1  
AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.     31   1.1  
AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.     31   1.1  
Z81075-4|CAB03047.2|  596|Caenorhabditis elegans Hypothetical pr...    30   2.6  
AJ005701-1|CAA06686.1|  596|Caenorhabditis elegans Na/Ca,K-excha...    30   2.6  

>Z98877-8|CAB63404.3|  475|Caenorhabditis elegans Hypothetical
           protein Y69H2.7 protein.
          Length = 475

 Score = 33.9 bits (74), Expect = 0.16
 Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
 Frame = -2

Query: 438 SNSFLQHPDNFYLPLKEMSPSEKYHF*LNV*FVLKYHIEEAHYLYRVFHCFRFLHYYLLF 259
           S  +LQ+ D     L E S +  + F +++ FVL   + +  + Y   + F+  +Y  +F
Sbjct: 191 SKLYLQNADVIARKLLEPSFAYSFQFTVDINFVLTGIVRQCKFTYSGRNTFKSFNY--MF 248

Query: 258 DHSYQRIECFSAFLWH*HSG--VTTAGALLVQPIVVYLTQFPLGV 130
            H Y   E F  F  + H G  +     L ++ +++    FP G+
Sbjct: 249 KHKYCESENFQLFYMN-HEGRFMEVHDTLTLKQMLIVHGAFPKGI 292


>U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily assigned
            gene nameprotein 152, isoform a protein.
          Length = 2560

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +2

Query: 590  LADIAAELPASLTIDPLTGQIYSL 661
            L D+  E P SLTIDP+TG +  L
Sbjct: 1218 LVDLQMEWPTSLTIDPITGSVLVL 1241


>AC006830-7|AAK68613.2|  479|Caenorhabditis elegans Hypothetical
           protein ZK105.6 protein.
          Length = 479

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +3

Query: 315 VLPQCDTLEQTIRLVKSDISLME-TFPLKEDKNCQDVAEMNSNSEKELGAIVIANEEDKI 491
           V  QC T + T+     D  + E T P K+D NC D   M + ++ E     +A +  KI
Sbjct: 77  VKEQCSTPDYTLISSNYDTFVQEFTTPPKDDSNCSDTYYMYNQAKCEAMMSDVAQKTLKI 136

Query: 492 STLE 503
           S ++
Sbjct: 137 SKVD 140


>AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.
          Length = 2502

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +2

Query: 590  LADIAAELPASLTIDPLTGQIYSL 661
            L D+  E P SLTIDP+TG +  L
Sbjct: 1160 LVDLQMEWPTSLTIDPITGSVLVL 1183


>AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.
          Length = 2684

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +2

Query: 590  LADIAAELPASLTIDPLTGQIYSL 661
            L D+  E P SLTIDP+TG +  L
Sbjct: 1342 LVDLQMEWPTSLTIDPITGSVLVL 1365


>Z81075-4|CAB03047.2|  596|Caenorhabditis elegans Hypothetical
           protein F35C12.2a protein.
          Length = 596

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = +3

Query: 405 KNCQDVAEMNSNSEKELGAIVIANEEDK-ISTLEGSY*KEMSTGKKQLAPVYQRAVVLRD 581
           K   D  E +++  ++L A V  N  +  ++ LEGS  +  S+ ++Q  P+     + R+
Sbjct: 258 KKGSDSEEASAHETQKLAADVPHNNNNNDLAQLEGSELRRRSSARRQSVPILHSGTMFRN 317

Query: 582 GKL*LILQ 605
           G + L+ Q
Sbjct: 318 GIMQLMNQ 325


>AJ005701-1|CAA06686.1|  596|Caenorhabditis elegans
           Na/Ca,K-exchanger protein.
          Length = 596

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = +3

Query: 405 KNCQDVAEMNSNSEKELGAIVIANEEDK-ISTLEGSY*KEMSTGKKQLAPVYQRAVVLRD 581
           K   D  E +++  ++L A V  N  +  ++ LEGS  +  S+ ++Q  P+     + R+
Sbjct: 258 KKGSDSEEASAHETQKLAADVPHNNNNNDLAQLEGSELRRRSSARRQSVPILHSGTMFRN 317

Query: 582 GKL*LILQ 605
           G + L+ Q
Sbjct: 318 GIMQLMNQ 325


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,862,089
Number of Sequences: 27780
Number of extensions: 301385
Number of successful extensions: 720
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)