Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_L07
         (888 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_07_0045 + 12328388-12328419,12328504-12328645,12328862-123290...    29   4.9  
08_02_0459 + 17420156-17420976,17422291-17424199                       29   4.9  
02_03_0224 - 16577234-16577494,16577798-16577996,16578069-165781...    29   4.9  

>10_07_0045 +
           12328388-12328419,12328504-12328645,12328862-12329054,
           12329224-12329320,12329404-12329528,12329616-12329734,
           12331225-12331298,12331359-12331413,12331450-12331500,
           12331611-12331857,12331940-12332036,12332170-12332244,
           12334286-12334488,12334757-12334905,12334995-12335168,
           12335276-12335401,12335493-12335623,12335743-12335818,
           12335898-12336027,12336115-12336193,12336267-12336465,
           12336591-12336698,12336769-12337025,12337267-12337282
          Length = 984

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 545 LPSHKVHGKTISNWELMEKLRKMIQPESFS 634
           LPSHK     +  W ++E+L++ IQ +S S
Sbjct: 670 LPSHKWGDLNVIKWPIIEQLKERIQEDSSS 699


>08_02_0459 + 17420156-17420976,17422291-17424199
          Length = 909

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = +2

Query: 560 VHGKTISNWELMEKLRKMIQPESFSLLKVSKHSSEVIRFDAEIENYSMLKM 712
           VH  T    +L E + KM   E+   + +S HSS +++   ++EN   LK+
Sbjct: 644 VHLFTDIRIQLPEGIAKMRSLETLKWVDLSNHSSNIVKELGQLENLRELKL 694


>02_03_0224 -
           16577234-16577494,16577798-16577996,16578069-16578139,
           16578442-16578517,16578632-16578762,16578853-16578978,
           16579075-16579248,16579414-16579484,16579752-16579923,
           16581780-16581892,16582705-16582779,16582913-16583009,
           16583448-16583534,16583535-16583589,16583650-16583828
          Length = 628

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 545 LPSHKVHGKTISNWELMEKLRKMIQPESFS 634
           LPSHK     +  W ++E+L++ IQ +S S
Sbjct: 400 LPSHKWGDLNVIKWPIIEQLKERIQEDSSS 429


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,659,900
Number of Sequences: 37544
Number of extensions: 297544
Number of successful extensions: 501
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 501
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)