BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_L07
(888 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M99578-1|AAA36187.1| 550|Homo sapiens protein ( Human lymphocyt... 99 2e-20
L03426-2|AAA61303.1| 385|Homo sapiens XE7 protein. 99 2e-20
L03426-1|AAA61304.1| 695|Homo sapiens XE7 protein. 99 2e-20
BC110497-1|AAI10498.1| 695|Homo sapiens splicing factor, argini... 99 2e-20
BC110496-1|AAI10497.1| 695|Homo sapiens splicing factor, argini... 99 2e-20
BC028151-1|AAH28151.1| 446|Homo sapiens SFRS17A protein protein. 99 2e-20
BC016935-1|AAH16935.1| 292|Homo sapiens Unknown (protein for IM... 99 2e-20
AL683807-2|CAI41501.1| 695|Homo sapiens chromosome X and Y open... 99 2e-20
AL683807-1|CAI41499.1| 446|Homo sapiens chromosome X and Y open... 99 2e-20
>M99578-1|AAA36187.1| 550|Homo sapiens protein ( Human lymphocyte
surface protein exons 1-5, complete cds. ).
Length = 550
Score = 98.7 bits (235), Expect = 2e-20
Identities = 48/108 (44%), Positives = 71/108 (65%)
Frame = +2
Query: 464 DTSDAVALYLPQRLYLKSYAKLNISVQLPSHKVHGKTISNWELMEKLRKMIQPESFSLLK 643
DTS+AV L LYLK K+ ISV LP K GK+ISNWE+ME+L+ M+Q FS L+
Sbjct: 9 DTSEAVELCPAYGLYLKPITKMTISVALPQLKQPGKSISNWEVMERLKGMVQNHQFSTLR 68
Query: 644 VSKHSSEVIRFDAEIENYSMLKMVIMRLDERVVKLNDXPEPLRVKVVK 787
+SK + + IRF+ E+EN S++K + LD + +KL+ + L+V+ +
Sbjct: 69 ISKSTMDFIRFEGEVENKSLVKSFLACLDGKTIKLSGFSDILKVRAAE 116
>L03426-2|AAA61303.1| 385|Homo sapiens XE7 protein.
Length = 385
Score = 98.7 bits (235), Expect = 2e-20
Identities = 48/108 (44%), Positives = 71/108 (65%)
Frame = +2
Query: 464 DTSDAVALYLPQRLYLKSYAKLNISVQLPSHKVHGKTISNWELMEKLRKMIQPESFSLLK 643
DTS+AV L LYLK K+ ISV LP K GK+ISNWE+ME+L+ M+Q FS L+
Sbjct: 9 DTSEAVELCPAYGLYLKPITKMTISVALPQLKQPGKSISNWEVMERLKGMVQNHQFSTLR 68
Query: 644 VSKHSSEVIRFDAEIENYSMLKMVIMRLDERVVKLNDXPEPLRVKVVK 787
+SK + + IRF+ E+EN S++K + LD + +KL+ + L+V+ +
Sbjct: 69 ISKSTMDFIRFEGEVENKSLVKSFLACLDGKTIKLSGFSDILKVRAAE 116
>L03426-1|AAA61304.1| 695|Homo sapiens XE7 protein.
Length = 695
Score = 98.7 bits (235), Expect = 2e-20
Identities = 48/108 (44%), Positives = 71/108 (65%)
Frame = +2
Query: 464 DTSDAVALYLPQRLYLKSYAKLNISVQLPSHKVHGKTISNWELMEKLRKMIQPESFSLLK 643
DTS+AV L LYLK K+ ISV LP K GK+ISNWE+ME+L+ M+Q FS L+
Sbjct: 9 DTSEAVELCPAYGLYLKPITKMTISVALPQLKQPGKSISNWEVMERLKGMVQNHQFSTLR 68
Query: 644 VSKHSSEVIRFDAEIENYSMLKMVIMRLDERVVKLNDXPEPLRVKVVK 787
+SK + + IRF+ E+EN S++K + LD + +KL+ + L+V+ +
Sbjct: 69 ISKSTMDFIRFEGEVENKSLVKSFLACLDGKTIKLSGFSDILKVRAAE 116
>BC110497-1|AAI10498.1| 695|Homo sapiens splicing factor,
arginine/serine-rich 17A protein.
Length = 695
Score = 98.7 bits (235), Expect = 2e-20
Identities = 48/108 (44%), Positives = 71/108 (65%)
Frame = +2
Query: 464 DTSDAVALYLPQRLYLKSYAKLNISVQLPSHKVHGKTISNWELMEKLRKMIQPESFSLLK 643
DTS+AV L LYLK K+ ISV LP K GK+ISNWE+ME+L+ M+Q FS L+
Sbjct: 9 DTSEAVELCPAYGLYLKPITKMTISVALPQLKQPGKSISNWEVMERLKGMVQNHQFSTLR 68
Query: 644 VSKHSSEVIRFDAEIENYSMLKMVIMRLDERVVKLNDXPEPLRVKVVK 787
+SK + + IRF+ E+EN S++K + LD + +KL+ + L+V+ +
Sbjct: 69 ISKSTMDFIRFEGEVENKSLVKSFLACLDGKTIKLSGFSDILKVRAAE 116
>BC110496-1|AAI10497.1| 695|Homo sapiens splicing factor,
arginine/serine-rich 17A protein.
Length = 695
Score = 98.7 bits (235), Expect = 2e-20
Identities = 48/108 (44%), Positives = 71/108 (65%)
Frame = +2
Query: 464 DTSDAVALYLPQRLYLKSYAKLNISVQLPSHKVHGKTISNWELMEKLRKMIQPESFSLLK 643
DTS+AV L LYLK K+ ISV LP K GK+ISNWE+ME+L+ M+Q FS L+
Sbjct: 9 DTSEAVELCPAYGLYLKPITKMTISVALPQLKQPGKSISNWEVMERLKGMVQNHQFSTLR 68
Query: 644 VSKHSSEVIRFDAEIENYSMLKMVIMRLDERVVKLNDXPEPLRVKVVK 787
+SK + + IRF+ E+EN S++K + LD + +KL+ + L+V+ +
Sbjct: 69 ISKSTMDFIRFEGEVENKSLVKSFLACLDGKTIKLSGFSDILKVRAAE 116
>BC028151-1|AAH28151.1| 446|Homo sapiens SFRS17A protein protein.
Length = 446
Score = 98.7 bits (235), Expect = 2e-20
Identities = 48/108 (44%), Positives = 71/108 (65%)
Frame = +2
Query: 464 DTSDAVALYLPQRLYLKSYAKLNISVQLPSHKVHGKTISNWELMEKLRKMIQPESFSLLK 643
DTS+AV L LYLK K+ ISV LP K GK+ISNWE+ME+L+ M+Q FS L+
Sbjct: 9 DTSEAVELCPAYGLYLKPITKMTISVALPQLKQPGKSISNWEVMERLKGMVQNHQFSTLR 68
Query: 644 VSKHSSEVIRFDAEIENYSMLKMVIMRLDERVVKLNDXPEPLRVKVVK 787
+SK + + IRF+ E+EN S++K + LD + +KL+ + L+V+ +
Sbjct: 69 ISKSTMDFIRFEGEVENKSLVKSFLACLDGKTIKLSGFSDILKVRAAE 116
>BC016935-1|AAH16935.1| 292|Homo sapiens Unknown (protein for
IMAGE:4430810) protein.
Length = 292
Score = 98.7 bits (235), Expect = 2e-20
Identities = 48/108 (44%), Positives = 71/108 (65%)
Frame = +2
Query: 464 DTSDAVALYLPQRLYLKSYAKLNISVQLPSHKVHGKTISNWELMEKLRKMIQPESFSLLK 643
DTS+AV L LYLK K+ ISV LP K GK+ISNWE+ME+L+ M+Q FS L+
Sbjct: 9 DTSEAVELCPAYGLYLKPITKMTISVALPQLKQPGKSISNWEVMERLKGMVQNHQFSTLR 68
Query: 644 VSKHSSEVIRFDAEIENYSMLKMVIMRLDERVVKLNDXPEPLRVKVVK 787
+SK + + IRF+ E+EN S++K + LD + +KL+ + L+V+ +
Sbjct: 69 ISKSTMDFIRFEGEVENKSLVKSFLACLDGKTIKLSGFSDILKVRAAE 116
>AL683807-2|CAI41501.1| 695|Homo sapiens chromosome X and Y open
reading frame 3 protein.
Length = 695
Score = 98.7 bits (235), Expect = 2e-20
Identities = 48/108 (44%), Positives = 71/108 (65%)
Frame = +2
Query: 464 DTSDAVALYLPQRLYLKSYAKLNISVQLPSHKVHGKTISNWELMEKLRKMIQPESFSLLK 643
DTS+AV L LYLK K+ ISV LP K GK+ISNWE+ME+L+ M+Q FS L+
Sbjct: 9 DTSEAVELCPAYGLYLKPITKMTISVALPQLKQPGKSISNWEVMERLKGMVQNHQFSTLR 68
Query: 644 VSKHSSEVIRFDAEIENYSMLKMVIMRLDERVVKLNDXPEPLRVKVVK 787
+SK + + IRF+ E+EN S++K + LD + +KL+ + L+V+ +
Sbjct: 69 ISKSTMDFIRFEGEVENKSLVKSFLACLDGKTIKLSGFSDILKVRAAE 116
>AL683807-1|CAI41499.1| 446|Homo sapiens chromosome X and Y open
reading frame 3 protein.
Length = 446
Score = 98.7 bits (235), Expect = 2e-20
Identities = 48/108 (44%), Positives = 71/108 (65%)
Frame = +2
Query: 464 DTSDAVALYLPQRLYLKSYAKLNISVQLPSHKVHGKTISNWELMEKLRKMIQPESFSLLK 643
DTS+AV L LYLK K+ ISV LP K GK+ISNWE+ME+L+ M+Q FS L+
Sbjct: 9 DTSEAVELCPAYGLYLKPITKMTISVALPQLKQPGKSISNWEVMERLKGMVQNHQFSTLR 68
Query: 644 VSKHSSEVIRFDAEIENYSMLKMVIMRLDERVVKLNDXPEPLRVKVVK 787
+SK + + IRF+ E+EN S++K + LD + +KL+ + L+V+ +
Sbjct: 69 ISKSTMDFIRFEGEVENKSLVKSFLACLDGKTIKLSGFSDILKVRAAE 116
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,093,395
Number of Sequences: 237096
Number of extensions: 1764169
Number of successful extensions: 2240
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2240
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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