Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_L03
         (949 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL646016-1|CAI17009.1| 1865|Homo sapiens formin 2 protein.             27   1.1  
AL590490-1|CAH70931.1| 1865|Homo sapiens formin 2 protein.             27   1.1  
AL513342-1|CAI17121.1| 1865|Homo sapiens formin 2 protein.             27   1.1  
AL359918-1|CAI15795.1| 1865|Homo sapiens formin 2 protein.             27   1.1  

>AL646016-1|CAI17009.1| 1865|Homo sapiens formin 2 protein.
          Length = 1865

 Score = 27.5 bits (58), Expect(2) = 1.1
 Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
 Frame = +2

Query: 878  PXPGSG--PXXPXPGXGXPXPP 937
            P PG G  P  P PG G P PP
Sbjct: 1321 PLPGVGIPPPPPLPGVGIPPPP 1342



 Score = 24.6 bits (51), Expect(2) = 1.1
 Identities = 20/77 (25%), Positives = 21/77 (27%)
 Frame = +2

Query: 527  GXPPPRGLPXAKXXDPGAXPXAGPR*KXXFXXXXXXXXXXXXXXXXXXXAXVPGXGEPRX 706
            G PPP  LP A    P   P AG                            +PG G P  
Sbjct: 1249 GIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPP 1308

Query: 707  PXXXXXXXFPPWKXPXV 757
            P        PP   P V
Sbjct: 1309 PPLPGAGIPPPPPLPGV 1325


>AL590490-1|CAH70931.1| 1865|Homo sapiens formin 2 protein.
          Length = 1865

 Score = 27.5 bits (58), Expect(2) = 1.1
 Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
 Frame = +2

Query: 878  PXPGSG--PXXPXPGXGXPXPP 937
            P PG G  P  P PG G P PP
Sbjct: 1321 PLPGVGIPPPPPLPGVGIPPPP 1342



 Score = 24.6 bits (51), Expect(2) = 1.1
 Identities = 20/77 (25%), Positives = 21/77 (27%)
 Frame = +2

Query: 527  GXPPPRGLPXAKXXDPGAXPXAGPR*KXXFXXXXXXXXXXXXXXXXXXXAXVPGXGEPRX 706
            G PPP  LP A    P   P AG                            +PG G P  
Sbjct: 1249 GIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPP 1308

Query: 707  PXXXXXXXFPPWKXPXV 757
            P        PP   P V
Sbjct: 1309 PPLPGAGIPPPPPLPGV 1325


>AL513342-1|CAI17121.1| 1865|Homo sapiens formin 2 protein.
          Length = 1865

 Score = 27.5 bits (58), Expect(2) = 1.1
 Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
 Frame = +2

Query: 878  PXPGSG--PXXPXPGXGXPXPP 937
            P PG G  P  P PG G P PP
Sbjct: 1321 PLPGVGIPPPPPLPGVGIPPPP 1342



 Score = 24.6 bits (51), Expect(2) = 1.1
 Identities = 20/77 (25%), Positives = 21/77 (27%)
 Frame = +2

Query: 527  GXPPPRGLPXAKXXDPGAXPXAGPR*KXXFXXXXXXXXXXXXXXXXXXXAXVPGXGEPRX 706
            G PPP  LP A    P   P AG                            +PG G P  
Sbjct: 1249 GIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPP 1308

Query: 707  PXXXXXXXFPPWKXPXV 757
            P        PP   P V
Sbjct: 1309 PPLPGAGIPPPPPLPGV 1325


>AL359918-1|CAI15795.1| 1865|Homo sapiens formin 2 protein.
          Length = 1865

 Score = 27.5 bits (58), Expect(2) = 1.1
 Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
 Frame = +2

Query: 878  PXPGSG--PXXPXPGXGXPXPP 937
            P PG G  P  P PG G P PP
Sbjct: 1321 PLPGVGIPPPPPLPGVGIPPPP 1342



 Score = 24.6 bits (51), Expect(2) = 1.1
 Identities = 20/77 (25%), Positives = 21/77 (27%)
 Frame = +2

Query: 527  GXPPPRGLPXAKXXDPGAXPXAGPR*KXXFXXXXXXXXXXXXXXXXXXXAXVPGXGEPRX 706
            G PPP  LP A    P   P AG                            +PG G P  
Sbjct: 1249 GIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPP 1308

Query: 707  PXXXXXXXFPPWKXPXV 757
            P        PP   P V
Sbjct: 1309 PPLPGAGIPPPPPLPGV 1325


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,341,174
Number of Sequences: 237096
Number of extensions: 1556716
Number of successful extensions: 4021
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3826
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12492094950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)