Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_L02
         (903 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0883 + 22229278-22230009                                         30   2.2  
10_08_1061 - 22622805-22622961,22623262-22623441,22623482-226234...    30   2.9  
03_05_0923 + 28848925-28849272,28849636-28849869,28849965-288501...    30   2.9  
12_02_0680 + 21903520-21904093,21904474-21905162                       29   3.8  
01_06_0737 + 31592562-31592786,31593314-31593541,31593981-315940...    29   3.8  
04_04_1466 - 33799104-33799229,33799659-33799669,33800052-338002...    29   6.7  
04_04_0190 - 23442824-23442846,23442891-23442949,23443613-234437...    29   6.7  
06_01_1070 + 8750260-8750335,8750432-8751311,8753719-8754646           28   8.8  

>08_02_0883 + 22229278-22230009
          Length = 243

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = -3

Query: 430 ARHPRKHFPGNPAQANGATSHPCAL*NDLSHRQWLRSPAAGTSG--TCLRNMPA 275
           ARH  + FP N A A G++S        +S RQ   +PA  TS   T + ++P+
Sbjct: 111 ARHANRPFPANTAAAGGSSSS-----YSISQRQEAAAPARSTSNDDTAMSSVPS 159


>10_08_1061 -
           22622805-22622961,22623262-22623441,22623482-22623489,
           22623682-22623845,22623969-22624134
          Length = 224

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -3

Query: 484 PGSGTHDLEMELRNAQPNARHPRKHFPGNPAQANGAT 374
           PG+     EMELR A  + +HP  H P +PA  +G T
Sbjct: 185 PGAAMLIDEMELRQA--DEQHPGVHAPQSPAAVSGVT 219


>03_05_0923 +
           28848925-28849272,28849636-28849869,28849965-28850131,
           28850433-28850651,28850743-28850929,28851012-28851063,
           28851158-28851387,28851619-28851717,28851835-28852565,
           28853004-28853519,28854140-28854398
          Length = 1013

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -2

Query: 446 QCSTECKTSSKTLSWQPSSSKWRNFASLRTLKRPISQTVVK 324
           +C     + SKT++  P  S ++  ++L   KRP+  TV K
Sbjct: 683 RCDKNAISDSKTVALHPLPSSFKGLSALLVDKRPVRATVTK 723


>12_02_0680 + 21903520-21904093,21904474-21905162
          Length = 420

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 570 VCDVESEGDGAVLVEADGGEMAHAA 496
           V D+  +GDG++LV+   GE  H A
Sbjct: 185 VIDIAKQGDGSILVKTSSGEEFHGA 209


>01_06_0737 +
           31592562-31592786,31593314-31593541,31593981-31594054,
           31594595-31594754,31595979-31596098,31596185-31596293,
           31597447-31597628
          Length = 365

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 19/66 (28%), Positives = 30/66 (45%)
 Frame = +1

Query: 148 EFTDPPCLIDLECAECIPDNMPLVTSHRATNGTFRIASGDEVVLACYGGKFLMYPLQETL 327
           E T  P  +    A  IP     +T+ RA +GT RI+ G  V++   GG   +  +Q  +
Sbjct: 140 ELTSKPSTLSHVEASAIP--FAALTAWRALHGTARISEGQRVLVIGGGGAVGLAAVQLAV 197

Query: 328 TTVCEI 345
              C +
Sbjct: 198 AAGCSV 203


>04_04_1466 -
           33799104-33799229,33799659-33799669,33800052-33800200,
           33800261-33800299,33800690-33800746,33800839-33801628,
           33801705-33801980,33802051-33802117,33802211-33802285,
           33802618-33802812,33802927-33803076,33803152-33803522,
           33804070-33804193,33804246-33804275,33804306-33804417,
           33804919-33804985,33805138-33805180,33805768-33805872
          Length = 928

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
 Frame = +3

Query: 558 PHHKRTQEPPPH--GSPHRTNWPTQHSWQL*PHVRRKNSSRRXKTLL 692
           PHH   Q PPP     P    W   HSW         N+  R K LL
Sbjct: 16  PHHAAAQPPPPSYPPPPPGQGW-ANHSWAQSHGYAAHNTMHRDKCLL 61


>04_04_0190 -
           23442824-23442846,23442891-23442949,23443613-23443737,
           23443767-23443901,23444195-23444301,23444488-23444566,
           23444856-23444942,23445045-23445281,23445783-23446128,
           23446486-23446694
          Length = 468

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -2

Query: 290 P*HASTTSSPDAILKVPFVARCDVTKGMLSGMHSAHSR 177
           P H S+ S P  +  +PF++ CD   G++ G     S+
Sbjct: 371 PNHDSSHSKPAFLALLPFLSFCDEANGLIHGASQGTSK 408


>06_01_1070 + 8750260-8750335,8750432-8751311,8753719-8754646
          Length = 627

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 14/39 (35%), Positives = 16/39 (41%)
 Frame = +1

Query: 52  APQT*PHEHSTTFQFNMTWISFALLTFWFQLAEFTDPPC 168
           AP+T P     T  F   W    LLT    +  F  PPC
Sbjct: 109 APRTPPRRAELTGAFVFAWQGMLLLTVSAAMPVFRPPPC 147


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,680,606
Number of Sequences: 37544
Number of extensions: 577477
Number of successful extensions: 1803
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1801
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)