Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_L02
         (903 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB209109-1|BAD92346.1| 1096|Homo sapiens TATA element modulatory...    31   5.7  
AK074074-1|BAB84900.1| 1731|Homo sapiens FLJ00145 protein protein.     30   10.0 

>AB209109-1|BAD92346.1| 1096|Homo sapiens TATA element modulatory
           factor 1 variant protein.
          Length = 1096

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 34/148 (22%), Positives = 60/148 (40%), Gaps = 6/148 (4%)
 Frame = -2

Query: 599 GAMRRWFLGAFVMWSLRAMARSSSKQTVARWRTLREPGSWVWYARP*NGAPQCSTECKTS 420
           GAM  WF  A  + S    A S +++++ R   ++E    +W      G P  S+     
Sbjct: 2   GAMS-WF-NASQLSSFAKQALSQAQKSIDRVLDIQEEEPSIWAETIPYGEPGISSPVSGG 59

Query: 419 SKTLSWQPSSSKWRN---FASLRTLKRPISQTVVKVSCSGYIRNLPP*HASTTSSPDAIL 249
             T +W   S+        AS + + +P+ +TVV  S + +   L P    T      + 
Sbjct: 60  WDTSTWGLKSNTEPQSPPIASPKAITKPVRRTVVDESENFFSAFLSPTDVQTIQKSPVVS 119

Query: 248 KVPFVARC---DVTKGMLSGMHSAHSRS 174
           K P  ++    +V   +   +H   SR+
Sbjct: 120 KPPAKSQRPEEEVKSSLHESLHIGQSRT 147


>AK074074-1|BAB84900.1| 1731|Homo sapiens FLJ00145 protein protein.
          Length = 1731

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
 Frame = +1

Query: 10  PYHXTIGNP*DXE-FAPQT*PHEHSTTFQFNMTWISFALLTFWFQLAEFTDPPCLIDLEC 186
           P H   G+  + E F P T P  HS+  + + T  S   L  +   A+   PPC  +L  
Sbjct: 164 PEHGGRGSEDEQESFRPSTSPLSHSSPSEISGTSSSGCALESFGSAAQQQQPPCEQELSP 223

Query: 187 AECIPDNMPLVTSHRATNGTFRIASGDEVV 276
             C P  +  +T       ++   + D+ +
Sbjct: 224 LVCSPAGVSRLTYVSEPESSYPTTATDDAL 253


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,685,058
Number of Sequences: 237096
Number of extensions: 3225131
Number of successful extensions: 11740
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11728
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)