Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_L01
         (746 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    22   5.3  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   5.3  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   7.0  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   7.0  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   7.0  

>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -2

Query: 238 AIHGGIPRVDCAIVPASPTAGTTGG 164
           A+    P + CA  P+S    TT G
Sbjct: 341 ALFAKFPSLACAAEPSSDAVSTTSG 365


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 163 CHRWCRRLGRLEQW 204
           C R C RLGR++++
Sbjct: 247 CERLCNRLGRVKRF 260


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 9   PLLXHYYGXPLIXLXTR 59
           PLL   YG PL+ + T+
Sbjct: 219 PLLKKLYGGPLLRIFTK 235


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 9   PLLXHYYGXPLIXLXTR 59
           PLL   YG PL+ + T+
Sbjct: 234 PLLKKLYGGPLLRIFTK 250


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +2

Query: 218 WDTSMDRIGLPGT 256
           W+T +DR+ +PG+
Sbjct: 920 WETDIDRVLVPGS 932


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,089
Number of Sequences: 438
Number of extensions: 2315
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)