Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_K23
(803 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 26 1.1
10_03_0012 - 7037088-7037282,7037453-7037954,7038079-7038081,704... 29 3.3
06_03_1178 + 28203466-28204590,28204745-28205652,28206189-28206258 29 3.3
02_01_0606 + 4543031-4543177,4543287-4543709,4543836-4543952,454... 29 3.3
05_05_0181 + 23033059-23033775 29 4.3
03_01_0023 + 198414-198968 26 5.6
02_05_0686 - 30900748-30902167,30903442-30904742 26 6.3
07_03_1136 + 24218601-24218734,24218769-24219906 24 6.7
04_04_0887 + 29095087-29096166 28 7.6
10_08_0029 + 14270945-14271364,14271449-14272486 28 10.0
05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747 28 10.0
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 25.8 bits (54), Expect(2) = 1.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 563 KKKKXXGXXFXPPPPPP 613
KKKK PPPPPP
Sbjct: 101 KKKKRHHHHHPPPPPPP 117
Score = 23.8 bits (49), Expect(2) = 8.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 596 PPPPPPP 616
PPPPPPP
Sbjct: 126 PPPPPPP 132
Score = 23.8 bits (49), Expect(2) = 1.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 596 PPPPPPP 616
PPPPPPP
Sbjct: 129 PPPPPPP 135
Score = 22.6 bits (46), Expect(2) = 8.4
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 560 KKKKKXXGXXFXPPPPP 610
KKKK+ PPPPP
Sbjct: 101 KKKKRHHHHHPPPPPPP 117
>10_03_0012 -
7037088-7037282,7037453-7037954,7038079-7038081,
7040633-7041213
Length = 426
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +1
Query: 706 FFXPPPPXXXXXXXXXKXXXXXGGGGGXPPPP 801
F+ PPPP GGG PPPP
Sbjct: 72 FYPPPPPSMPGPLPAPYDHHHRGGGPAQPPPP 103
>06_03_1178 + 28203466-28204590,28204745-28205652,28206189-28206258
Length = 700
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 557 KKKKKKXXGXXFXPPPPPPP 616
+ KK G F PPPPPPP
Sbjct: 228 RAKKGGVGGPEFLPPPPPPP 247
>02_01_0606 +
4543031-4543177,4543287-4543709,4543836-4543952,
4544064-4544423
Length = 348
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +2
Query: 500 GGGGPSPXXXXXXXXXXXXKKKKKKXXGXXFXPPPPPPP 616
GGGG +P +K+K + PPPPP P
Sbjct: 97 GGGGNNPSSTSEGGSVSPSRKRKSESLDDSPPPPPPPHP 135
>05_05_0181 + 23033059-23033775
Length = 238
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 557 KKKKKKXXGXXFXPPPPPPP 616
+KKK+K PPPPPPP
Sbjct: 154 EKKKRKRTQQQQPPPPPPPP 173
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 557 KKKKKKXXGXXFXPPPPPPP 616
KKK+K+ PPPPPPP
Sbjct: 155 KKKRKRTQQQQPPPPPPPPP 174
>03_01_0023 + 198414-198968
Length = 184
Score = 25.8 bits (54), Expect(2) = 5.6
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 627 PXPXGGGGGGG 595
P P GGGGGGG
Sbjct: 33 PSPGGGGGGGG 43
Score = 21.4 bits (43), Expect(2) = 5.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3
Query: 615 GGGGGGGXK 589
GGGGGGG +
Sbjct: 44 GGGGGGGGR 52
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 25.8 bits (54), Expect(2) = 6.3
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 715 PPPPXXXXXXXXXKXXXXXGGGGGXPPPP 801
PPPP G GG PPPP
Sbjct: 353 PPPPPPPKGPSPPPPPPPGGKKGGPPPPP 381
Score = 21.0 bits (42), Expect(2) = 6.3
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +1
Query: 598 PPPPPP 615
PPPPPP
Sbjct: 344 PPPPPP 349
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 24.2 bits (50), Expect(2) = 6.7
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -3
Query: 621 PXGGGGGGGXKXXP 580
P GGGGGGG P
Sbjct: 173 PGGGGGGGGPGRAP 186
Score = 22.6 bits (46), Expect(2) = 6.7
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3
Query: 627 PXPXGGGGGGG 595
P GGGGGGG
Sbjct: 132 PPAPGGGGGGG 142
>04_04_0887 + 29095087-29096166
Length = 359
Score = 28.3 bits (60), Expect = 7.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 566 KKKXXGXXFXPPPPPPP 616
K G F PPPPPPP
Sbjct: 122 KSPRRGNHFSPPPPPPP 138
>10_08_0029 + 14270945-14271364,14271449-14272486
Length = 485
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -3
Query: 627 PXPXGGGGGGGXKXXP 580
P P GGGGGGG + P
Sbjct: 340 PSPGGGGGGGGGEFFP 355
>05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747
Length = 368
Score = 27.9 bits (59), Expect = 10.0
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -1
Query: 725 GGGGXKKKKKXXXXXXXXXXXXXXXXXXGEKXXPXXXGGGGGGXXKXP 582
GGGG KKKKK GGGGGG P
Sbjct: 97 GGGGGKKKKKNKNKNKNPANGQPGEPAPPAATAEVAAGGGGGGGSVPP 144
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,073,341
Number of Sequences: 37544
Number of extensions: 459263
Number of successful extensions: 14114
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8125
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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