Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_K16
         (895 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    25   1.2  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   2.8  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    22   8.7  

>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
 Frame = +2

Query: 215 PRDIHDFVT--WDREMGGGKVFGTLGESDQRLFGKGGYNREFFNDDRGKLTGQAYGTRVL 388
           P D  D++   + R+  G  V     E   R      Y +  +  D+  +TG AYG   +
Sbjct: 23  PEDTMDYIPTRFRRQERGSIVIQGTKEGKSRPSLDIDYKQRVY--DKNGMTGDAYGGLNI 80

Query: 389 GPGGDSTSYGG 421
            PG  S  + G
Sbjct: 81  RPGQPSRQHAG 91


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 449 WRSHWPSLDDHRNWY 405
           W +H P+ D   NWY
Sbjct: 661 WLNHSPNYDQVTNWY 675


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 346 IIIEELPVITTFTKKSLVALSQSPEDLPSPH 254
           III++  V  T  +K ++ALS  P  L   H
Sbjct: 21  IIIQDDDVECTMVEKRVLALSTKPPFLVQLH 51


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,632
Number of Sequences: 438
Number of extensions: 4305
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)