Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_K14
         (929 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0424 - 5601690-5601915,5602099-5602187,5603298-5603378,560...   252   4e-67
02_03_0080 + 14935664-14935796,14943858-14944175,14944352-149451...    29   4.0  
02_01_0425 - 3102629-3104692,3106505-3108546,3109918-3109989,311...    29   5.3  
06_01_0271 + 2009125-2009424,2009534-2009707,2010268-2010423           29   7.0  
02_04_0005 - 18843061-18843201,18843309-18843440,18844457-188453...    29   7.0  
10_08_0521 + 18500105-18500529,18501216-18501284,18501467-185015...    28   9.2  

>04_01_0424 -
           5601690-5601915,5602099-5602187,5603298-5603378,
           5604875-5605240
          Length = 253

 Score =  252 bits (616), Expect = 4e-67
 Identities = 124/204 (60%), Positives = 153/204 (75%)
 Frame = +2

Query: 170 RVLVGVKRVIDYAVKIRVKPDKSGVVTDGVKHSMNPFDEIAVEEAVRMKEKKLASEVIAV 349
           ++LV VKRV+DYAVK+RV+PD++GV T  VK SMNPF EIAVEEA+R++E   A+EV+A 
Sbjct: 2   KILVAVKRVVDYAVKVRVRPDRTGVETASVKMSMNPFCEIAVEEALRLRESGAATEVVAA 61

Query: 350 SCGPSQAQETLRTALAMGADRAIHVEVAGAEYDTLQPIHVAKILAKLSQDEKADLVIVGK 529
           + GPSQ+ +TLRTALAMGADRA+HV         L P+ VAKIL  L+  E   LVI+GK
Sbjct: 62  TVGPSQSADTLRTALAMGADRAVHVLHDPDPSRPLLPLAVAKILRALALQENPGLVILGK 121

Query: 530 QAIDDDSNQTAQMTAALLDWPQGTFASKIEKTDGALTITREIDGGLEVIKTKIPAVLSAD 709
           QAIDDD NQT QM A LL+WPQGTFASK+       T+ RE+DGG+E I   +PAV++ D
Sbjct: 122 QAIDDDCNQTGQMLAGLLNWPQGTFASKVILNKEKATVEREVDGGIETISLDLPAVITTD 181

Query: 710 LRLNEPRYATLPNIMKAKEXASQK 781
           LRLN+PRYATLPNIMKAK    +K
Sbjct: 182 LRLNQPRYATLPNIMKAKSKVIKK 205


>02_03_0080 +
           14935664-14935796,14943858-14944175,14944352-14945199,
           14945249-14945521
          Length = 523

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +2

Query: 482 AKLSQDEKADLVIVGKQAIDDDSNQTAQMTAAL--LDWPQGTFASKIEKTDG 631
           A+L      + + +G    D+D +  A  T+ L  +DWP G   + IEK DG
Sbjct: 29  ARLRSGNGEEAMQLGGDRYDNDVDGVAAFTSKLRRVDWPAGFKPTGIEKYDG 80


>02_01_0425 - 3102629-3104692,3106505-3108546,3109918-3109989,
            3110157-3111444
          Length = 1821

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = +2

Query: 542  DDSNQTAQMTAALLDWPQGTFASKIEKTDGALTITREIDGGLEVIKTKIPAVL 700
            DD+N       ++LD  Q  F+ KI K+ G L   +E+  G   +  ++P+ L
Sbjct: 1373 DDANIIKLSKLSILDLEQNMFSGKIPKSIGQLKRLKELRLGENKLYGELPSTL 1425


>06_01_0271 + 2009125-2009424,2009534-2009707,2010268-2010423
          Length = 209

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 18/79 (22%), Positives = 34/79 (43%)
 Frame = +2

Query: 287 IAVEEAVRMKEKKLASEVIAVSCGPSQAQETLRTALAMGADRAIHVEVAGAEYDTLQPIH 466
           +A E  VRM  K++  E+  +       Q  +    A+GAD+ +      A+ +    + 
Sbjct: 41  MAKERRVRMVAKQIQRELADMLTRDPVLQRAVLPEAALGADQYLSSLTTIADVELSNDLQ 100

Query: 467 VAKILAKLSQDEKADLVIV 523
           V K+   +  DE+   V +
Sbjct: 101 VCKVYVSVFGDERGKKVAI 119


>02_04_0005 -
           18843061-18843201,18843309-18843440,18844457-18845315,
           18845884-18845973,18846748-18846869,18846950-18847049,
           18847151-18847205,18847275-18847365,18847453-18847572,
           18847681-18847780,18847890-18848018,18848099-18848201,
           18848670-18848743,18848848-18848933,18849297-18849358,
           18849454-18849541,18849937-18850029
          Length = 814

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -3

Query: 663 PPSISRVIVRAPSVFSIFDANVPCGQSNKAAVI 565
           PP++   ++    ++   D ++P G  NKAAV+
Sbjct: 702 PPTVREPVINRSGMYPKVDLDIPIGIHNKAAVV 734


>10_08_0521 +
           18500105-18500529,18501216-18501284,18501467-18501555,
           18501726-18501838,18502023-18502124,18502576-18502663,
           18502795-18503361,18503766-18504149,18504168-18504384,
           18504466-18504548,18505174-18505256,18505796-18506032,
           18506481-18506658,18506814-18507328,18507740-18507916,
           18508385-18508768,18508885-18509031
          Length = 1285

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -3

Query: 699 STAGIFVLITSKPPSISRVIVRAPSVFSIFDANVPCGQSNKAAVICA 559
           S A +F +   +PPS  R  +R P +   F A   CG+ N  A+ CA
Sbjct: 112 SPATVFRIRLKQPPSSLRHKMRVPELCRNFSAVAWCGKLN--AIACA 156


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,993,561
Number of Sequences: 37544
Number of extensions: 489091
Number of successful extensions: 1308
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1307
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)