Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_K13
(890 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0582 - 4318837-4318967,4319219-4319399,4319504-4319701,431... 258 6e-69
07_03_1272 - 25360180-25360286,25360454-25360658,25360748-253609... 254 5e-68
01_07_0115 - 41164227-41164452,41164515-41164601,41164757-41165313 31 0.93
11_06_0458 + 23808402-23808469,23808800-23809684,23810011-238119... 29 6.6
01_06_0364 - 28749825-28750053,28750442-28750621,28751018-287511... 29 6.6
08_01_0152 - 1190358-1190462,1190648-1190765,1191134-1192691,119... 28 8.7
01_06_0902 + 32853708-32853739,32854787-32855596,32856094-328561... 28 8.7
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308... 28 8.7
>03_01_0582 -
4318837-4318967,4319219-4319399,4319504-4319701,
4319791-4320053,4320453-4320597
Length = 305
Score = 258 bits (631), Expect = 6e-69
Identities = 119/199 (59%), Positives = 149/199 (74%)
Frame = +3
Query: 96 ISATMSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWE 275
++A G L+ E+DV MLAA HLG +N +FQME YVYKRR+DG ++INL +TWE
Sbjct: 1 MAAVAGGAARALSQAEQDVQMMLAADVHLGTKNCDFQMERYVYKRRSDGIYIINLGKTWE 60
Query: 276 KLVLAARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAF 455
KL LAAR +VAIENP D+ V S+RP+GQRAVLKFA +TGA IAGR TPG FTNQ+Q +F
Sbjct: 61 KLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF 120
Query: 456 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWW 635
EPRLLI+ DP DHQPI E++ NIP IA C+TDSP+R+VDI IP N K +SIG ++W
Sbjct: 121 SEPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCLFW 180
Query: 636 LLAREVLRLRGVLPRDQRW 692
LLAR VL++RG + +W
Sbjct: 181 LLARMVLQMRGTILPGHKW 199
Score = 32.3 bits (70), Expect = 0.53
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +1
Query: 709 LFFYRDPEESEKDEQQAKEQ 768
LFFYRDPEE+++ E++A Q
Sbjct: 205 LFFYRDPEEAKEQEEEAPAQ 224
>07_03_1272 -
25360180-25360286,25360454-25360658,25360748-25360945,
25361034-25361296,25361865-25362009
Length = 305
Score = 254 bits (623), Expect = 5e-68
Identities = 116/188 (61%), Positives = 143/188 (76%)
Frame = +3
Query: 129 LALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVA 308
L+ E+D+ MLAA HLG +N +FQME YVYKRR DG ++INL +TWEKL LAAR +VA
Sbjct: 12 LSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARVIVA 71
Query: 309 IENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDP 488
IENP D+ V S+RP+GQRAVLKFA +TGA IAGR TPG FTNQ+Q +F EPRLLI+ DP
Sbjct: 72 IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDP 131
Query: 489 AQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRG 668
DHQPI E++ NIP IA C+TDSP+R+VDI IP N K SIG ++WLLAR VL++RG
Sbjct: 132 RTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRG 191
Query: 669 VLPRDQRW 692
+ +W
Sbjct: 192 TILPGHKW 199
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +1
Query: 709 LFFYRDPEESEKDEQQAKEQAVV 777
LFFYRDPEE++ EQ+ +E A+V
Sbjct: 205 LFFYRDPEEAK--EQEEEEAALV 225
>01_07_0115 - 41164227-41164452,41164515-41164601,41164757-41165313
Length = 289
Score = 31.5 bits (68), Expect = 0.93
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -2
Query: 727 GHGRRTKSTTTSQRWSRGSTPRSLNTSRANNHHIKPIEWEDLVL 596
G GRR ++ T RW S + R H I P+ ++DL+L
Sbjct: 157 GRGRRRRAPTWHGRWKMWPPATSSGSGRGRYHPI-PVRYQDLIL 199
>11_06_0458 + 23808402-23808469,23808800-23809684,23810011-23811961,
23812210-23812285,23813064-23813072,23813243-23813335,
23813578-23813581,23813780-23814703,23814926-23815909,
23816073-23816118,23816376-23816951,23817253-23817798,
23817820-23818416
Length = 2252
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 196 TFSAPRWVVAASILVTSSSLRASTSNP 116
TF A RWV+AA V + L AS S+P
Sbjct: 2100 TFHAHRWVLAARSPVLKAKLSASPSSP 2126
>01_06_0364 -
28749825-28750053,28750442-28750621,28751018-28751147,
28751442-28751756,28752033-28752075,28752108-28752500
Length = 429
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 338 LITALRSACCTEVCRAHRCYAYCGAFHTRCF 430
L+ LR T+V RAHRC A T CF
Sbjct: 97 LLPLLRRRGATDVVRAHRCIPLHPALITSCF 127
>08_01_0152 -
1190358-1190462,1190648-1190765,1191134-1192691,
1193338-1193530
Length = 657
Score = 28.3 bits (60), Expect = 8.7
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -3
Query: 378 QTSVQHADRRAVMR*RTHQRGSRWLRQHEQPEQVFPRYDAS*SHGYHQHVVC 223
+ SV + D+ ++ RT RGS L QPE + PRY+ H VC
Sbjct: 269 KNSVNNDDKPMLVSIRTKGRGSSTLPSIAQPEPL-PRYNKHWRRKAHSMCVC 319
>01_06_0902 +
32853708-32853739,32854787-32855596,32856094-32856157,
32856375-32856446
Length = 325
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +2
Query: 203 PDGDLCLQTTC*WYPCDQLASYLGKTCSGCSCCRSH 310
P +C+ T C C K CS CSC + H
Sbjct: 265 PQNSVCMVTLCTSEICSGRRYAAKKLCSACSCHKRH 300
>01_01_0409 -
3084821-3084988,3085069-3085155,3085270-3085476,
3085904-3085985,3086085-3086275,3086410-3086616,
3086709-3086871,3087905-3087960,3088035-3088148,
3088599-3089807
Length = 827
Score = 28.3 bits (60), Expect = 8.7
Identities = 22/78 (28%), Positives = 27/78 (34%)
Frame = +2
Query: 149 CHQNACCNHPSWGRKC*LPDGDLCLQTTC*WYPCDQLASYLGKTCSGCSCCRSHREPR*C 328
CH C P GR+ P G + CD A+ G TC C H+ P C
Sbjct: 324 CHAGKCGGCPLQGRRT-CPCGKKDYPSL----DCDAEAATCGSTCEKVLGCGRHKCPERC 378
Query: 329 VRHLITALRSACCTEVCR 382
R T+ CR
Sbjct: 379 HRGSCVETCRLVITKSCR 396
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,182,182
Number of Sequences: 37544
Number of extensions: 580280
Number of successful extensions: 1496
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1496
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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