Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_K10
         (905 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    25   0.95 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   1.7  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   1.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   1.7  
AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein ...    23   3.8  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 25.0 bits (52), Expect = 0.95
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +2

Query: 680  KGSQEDPLIFSTGSDAQ 730
            +G Q+DP+IFST  D++
Sbjct: 1126 EGEQKDPVIFSTSFDSK 1142


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 183 RYQAFPPGSSLVRSPVSDPAAYRIPVRL 266
           +YQ  P    +  + + DPA YRI  R+
Sbjct: 398 KYQIVPSALEIFSTSMKDPAFYRIYKRI 425


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 183 RYQAFPPGSSLVRSPVSDPAAYRIPVRL 266
           +YQ  P    +  + + DPA YRI  R+
Sbjct: 398 KYQIVPSALEIFSTSMKDPAFYRIYKRI 425


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
 Frame = +3

Query: 45  LQKASKRPGTCK-KAALLAFFHRLRPPDEHH 134
           L   S    TC  + A L  +H + PP  HH
Sbjct: 490 LGSVSSTESTCSGEVASLTEYHHVAPPSGHH 520


>AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein
           protein.
          Length = 87

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -3

Query: 120 GGGAYGKTPATRPFYRFLAF 61
           G   YG  P  + FYRF  +
Sbjct: 68  GASGYGFVPPNQAFYRFFYY 87


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 246,992
Number of Sequences: 438
Number of extensions: 6873
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)