Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_K09
         (918 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0976 - 7576334-7579090,7581001-7581150,7581236-7581850           97   2e-20
11_05_0014 + 18392622-18392834,18393064-18393147,18393709-183937...    61   1e-09
10_01_0232 + 2456449-2456652,2456814-2456897,2459113-2459201,245...    51   1e-06
02_03_0234 - 16696440-16696658,16696822-16696945,16698070-16698503     29   3.9  
03_05_0065 + 20450814-20452748                                         28   9.0  

>06_01_0976 - 7576334-7579090,7581001-7581150,7581236-7581850
          Length = 1173

 Score = 97.1 bits (231), Expect = 2e-20
 Identities = 47/135 (34%), Positives = 72/135 (53%)
 Frame = +2

Query: 434 KESDADIDTMSLYPSFEFQPSWLRTKEFWDRTFEERYEKIKNDSRRPRLKVIVVPHSHND 613
           +E+  DI T  LY   +F          W + +E  Y+  + D  +  LKV V PHSHND
Sbjct: 123 REAHVDITTKDLYDRIQFLDV---DGGAWKQGWEVSYKSDEWDGEK--LKVFVAPHSHND 177

Query: 614 PGWLKTFEHYFEWKTKNIINNIVQKLHQYPNMTFIWTEISFLNSWWERSHXXXXXXXXXX 793
           PGW  T E Y+E ++++I++ I++ L +     F+W E+S+L  WW  +           
Sbjct: 178 PGWRLTVEEYYEKQSRHILDTIIESLSKDSRRKFLWEEMSYLERWWRDAPRKKQEAFTKL 237

Query: 794 XXEGRLEITTGGWVM 838
             +G+LEI +GGWVM
Sbjct: 238 VRDGQLEIVSGGWVM 252


>11_05_0014 +
           18392622-18392834,18393064-18393147,18393709-18393797,
           18393889-18394063,18394370-18394489,18394591-18394677,
           18394755-18394826,18395166-18395279,18395387-18395487,
           18395576-18395669,18395794-18395961,18396287-18396352,
           18396475-18396531,18396708-18396927,18397015-18397151,
           18397573-18397641,18397722-18397781,18397927-18397998,
           18398171-18398218,18398376-18398495,18398743-18398808,
           18399341-18399453,18399821-18399905,18400246-18400356,
           18400436-18400531,18401075-18401143,18401235-18401453
          Length = 974

 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
 Frame = +2

Query: 575 RLKVIVVPHSHNDPGWLKTFEHYFEWK--------TKNIINNIVQKLHQYPNMTFIWTEI 730
           +L V VVPH+H+D GWLKT + Y+            +N+++++V  L +  N  F++ E 
Sbjct: 40  KLNVHVVPHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSLVPALLKDENRKFVYVEQ 99

Query: 731 SFLNSWWERSHXXXXXXXXXXXXEGRLEITTGGWVM 838
           +F   WW +               GRLE+  GG  M
Sbjct: 100 AFFQRWWRQQSDMIKDIVKGLISTGRLELINGGMCM 135


>10_01_0232 +
           2456449-2456652,2456814-2456897,2459113-2459201,
           2459245-2459452,2459764-2459883,2460004-2460087,
           2460171-2460242,2460342-2460455,2460852-2460952,
           2461024-2461117,2461265-2461432,2461539-2461616,
           2461908-2461973,2462052-2462108,2462353-2462572,
           2462867-2463003,2465379-2465450,2465530-2465577,
           2465681-2465806,2465982-2466047,2466508-2466620,
           2467348-2467432,2467885-2467980,2468067-2468114,
           2468190-2468258,2468393-2468581
          Length = 935

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
 Frame = +2

Query: 575 RLKVIVVPHSHNDPGWLKTFEHYFEWKTK--------NIINNIVQKLHQYPNMTFIWTEI 730
           +L V +VPHSH+D GWLKT + YF             N ++++V  L   P   F++ E 
Sbjct: 37  KLNVHLVPHSHDDVGWLKTIDQYFVGTNNSIQGACVMNTLDSVVDALILDPARKFVFAEQ 96

Query: 731 SFLNSWWERSHXXXXXXXXXXXXEGRLE 814
           +F   WW                 G+LE
Sbjct: 97  AFFQRWWAEKSPKIQAIVHKLVDSGQLE 124


>02_03_0234 - 16696440-16696658,16696822-16696945,16698070-16698503
          Length = 258

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 514 FLCAQPARLELERWIQRHGVNVSIAFFENWT 422
           FL  QP   +LERW      +  + +FENW+
Sbjct: 159 FLVEQPDIDDLERWAAGKARDSEVQYFENWS 189


>03_05_0065 + 20450814-20452748
          Length = 644

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 282 PNPTTSNTIARIRVEKGLQRSSLALMLQSL 193
           PNP T NT+     +KGL   ++ L+ Q L
Sbjct: 459 PNPVTFNTLINFLCKKGLVEQAIELLKQML 488


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,979,786
Number of Sequences: 37544
Number of extensions: 502760
Number of successful extensions: 1210
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1209
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)