Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_K05
(884 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC050632-1|AAH50632.1| 399|Homo sapiens lymphoid enhancer-bindi... 31 7.3
AK123855-1|BAC85711.1| 676|Homo sapiens protein ( Homo sapiens ... 31 7.3
AF294627-1|AAG26886.1| 329|Homo sapiens lymphoid enhancer facto... 31 7.3
AF288571-1|AAG01022.1| 399|Homo sapiens lymphoid enhancer facto... 31 7.3
AF198532-1|AAF13268.1| 399|Homo sapiens lymphoid enhancer bindi... 31 7.3
BC071596-1|AAH71596.1| 1287|Homo sapiens RAB6 interacting protei... 30 9.7
BC009354-1|AAH09354.2| 948|Homo sapiens RAB6IP1 protein protein. 30 9.7
AK025499-1|BAB15155.1| 872|Homo sapiens protein ( Homo sapiens ... 30 9.7
AB209378-1|BAD92615.1| 317|Homo sapiens T-box 2 variant protein. 30 9.7
AB029014-1|BAA83043.1| 1359|Homo sapiens KIAA1091 protein protein. 30 9.7
>BC050632-1|AAH50632.1| 399|Homo sapiens lymphoid enhancer-binding
factor 1 protein.
Length = 399
Score = 30.7 bits (66), Expect = 7.3
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +1
Query: 97 IPNYYISSPRSWXCVNAEVYWEDEEGYPVSGQFSKRHPRDVTWD 228
IP +Y SP + + W+ + YP++G F + +P ++ D
Sbjct: 193 IPTFYPLSPGGVGQITPPLGWQGQPVYPITGGFRQPYPSSLSVD 236
>AK123855-1|BAC85711.1| 676|Homo sapiens protein ( Homo sapiens
cDNA FLJ41861 fis, clone NTONG2008672. ).
Length = 676
Score = 30.7 bits (66), Expect = 7.3
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = +2
Query: 62 SQAAKPDTSQNEFQTIIFLRHGPGCVSTQKFIGRTKKDIQLAVSFQSDTRVTSPGTNKWG 241
++ A PD + E PGC S +G T+ + V F V PG NK G
Sbjct: 348 TRRAGPDVVEMEAVVSEPSAGAPGCCSGAPALGLTQVPRKKKVRFS----VAGPGPNKPG 403
Query: 242 EGRSSAR 262
G++SAR
Sbjct: 404 SGQASAR 410
>AF294627-1|AAG26886.1| 329|Homo sapiens lymphoid enhancer factor 1
isoform protein.
Length = 329
Score = 30.7 bits (66), Expect = 7.3
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +1
Query: 97 IPNYYISSPRSWXCVNAEVYWEDEEGYPVSGQFSKRHPRDVTWD 228
IP +Y SP + + W+ + YP++G F + +P ++ D
Sbjct: 193 IPTFYPLSPGGVGQITPPLGWQGQPVYPITGGFRQPYPSSLSVD 236
>AF288571-1|AAG01022.1| 399|Homo sapiens lymphoid enhancer factor-1
protein.
Length = 399
Score = 30.7 bits (66), Expect = 7.3
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +1
Query: 97 IPNYYISSPRSWXCVNAEVYWEDEEGYPVSGQFSKRHPRDVTWD 228
IP +Y SP + + W+ + YP++G F + +P ++ D
Sbjct: 193 IPTFYPLSPGGVGQITPPLGWQGQPVYPITGGFRQPYPSSLSVD 236
>AF198532-1|AAF13268.1| 399|Homo sapiens lymphoid enhancer binding
factor-1 protein.
Length = 399
Score = 30.7 bits (66), Expect = 7.3
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +1
Query: 97 IPNYYISSPRSWXCVNAEVYWEDEEGYPVSGQFSKRHPRDVTWD 228
IP +Y SP + + W+ + YP++G F + +P ++ D
Sbjct: 193 IPTFYPLSPGGVGQITPPLGWQGQPVYPITGGFRQPYPSSLSVD 236
>BC071596-1|AAH71596.1| 1287|Homo sapiens RAB6 interacting protein 1
protein.
Length = 1287
Score = 30.3 bits (65), Expect = 9.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 155 IGRTKKDIQLAVSFQSDTRVTSPGTNKWGEGRSSARWAK 271
IG+ K + QSD T P +NKW + + A+W +
Sbjct: 660 IGQGKYEPGFFPKLQSDVLSTGPASNKWTKRNAPAQWRR 698
>BC009354-1|AAH09354.2| 948|Homo sapiens RAB6IP1 protein protein.
Length = 948
Score = 30.3 bits (65), Expect = 9.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 155 IGRTKKDIQLAVSFQSDTRVTSPGTNKWGEGRSSARWAK 271
IG+ K + QSD T P +NKW + + A+W +
Sbjct: 321 IGQGKYEPGFFPKLQSDVLSTGPASNKWTKRNAPAQWRR 359
>AK025499-1|BAB15155.1| 872|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21846 fis, clone HEP01887. ).
Length = 872
Score = 30.3 bits (65), Expect = 9.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 155 IGRTKKDIQLAVSFQSDTRVTSPGTNKWGEGRSSARWAK 271
IG+ K + QSD T P +NKW + + A+W +
Sbjct: 245 IGQGKYEPGFFPKLQSDVLSTGPASNKWTKRNAPAQWRR 283
>AB209378-1|BAD92615.1| 317|Homo sapiens T-box 2 variant protein.
Length = 317
Score = 30.3 bits (65), Expect = 9.7
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 215 TSPGTNKWGEGRSSARWAKMMM 280
T GT +WG GRSS RWA +++
Sbjct: 292 TGGGTGRWG-GRSSGRWAGLLL 312
>AB029014-1|BAA83043.1| 1359|Homo sapiens KIAA1091 protein protein.
Length = 1359
Score = 30.3 bits (65), Expect = 9.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 155 IGRTKKDIQLAVSFQSDTRVTSPGTNKWGEGRSSARWAK 271
IG+ K + QSD T P +NKW + + A+W +
Sbjct: 732 IGQGKYEPGFFPKLQSDVLSTGPASNKWTKRNAPAQWRR 770
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,623,411
Number of Sequences: 237096
Number of extensions: 2466083
Number of successful extensions: 8638
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8633
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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