Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_K02
         (921 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC039257-1|AAH39257.1| 1391|Homo sapiens nucleoporin 155kDa prot...    31   5.9  
AJ007558-1|CAA07553.1| 1391|Homo sapiens nucleoporin 155 protein.      31   5.9  
AF165926-1|AAD52966.1| 1332|Homo sapiens NUP155 protein.               31   5.9  
AB018334-1|BAA34511.2| 1357|Homo sapiens KIAA0791 protein protein.     31   5.9  

>BC039257-1|AAH39257.1| 1391|Homo sapiens nucleoporin 155kDa protein.
          Length = 1391

 Score = 31.1 bits (67), Expect = 5.9
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = +2

Query: 722  YIYXREYSKALTLSRTVEPLGSPHGLGIHGRVIGSPEHYAWGIKAF 859
            Y   R Y   + LS T      P GLG+H    G PE    G++AF
Sbjct: 920  YRQVRFYEGVVELSLTAAEKKDPQGLGLHFYKHGEPEEDIVGLQAF 965


>AJ007558-1|CAA07553.1| 1391|Homo sapiens nucleoporin 155 protein.
          Length = 1391

 Score = 31.1 bits (67), Expect = 5.9
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = +2

Query: 722  YIYXREYSKALTLSRTVEPLGSPHGLGIHGRVIGSPEHYAWGIKAF 859
            Y   R Y   + LS T      P GLG+H    G PE    G++AF
Sbjct: 920  YRQVRFYEGVVELSLTAAEKKDPQGLGLHFYKHGEPEEDIVGLQAF 965


>AF165926-1|AAD52966.1| 1332|Homo sapiens NUP155 protein.
          Length = 1332

 Score = 31.1 bits (67), Expect = 5.9
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = +2

Query: 722 YIYXREYSKALTLSRTVEPLGSPHGLGIHGRVIGSPEHYAWGIKAF 859
           Y   R Y   + LS T      P GLG+H    G PE    G++AF
Sbjct: 861 YRQVRFYEGVVELSLTAAEKKDPQGLGLHFYKHGEPEEDIVGLQAF 906


>AB018334-1|BAA34511.2| 1357|Homo sapiens KIAA0791 protein protein.
          Length = 1357

 Score = 31.1 bits (67), Expect = 5.9
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = +2

Query: 722  YIYXREYSKALTLSRTVEPLGSPHGLGIHGRVIGSPEHYAWGIKAF 859
            Y   R Y   + LS T      P GLG+H    G PE    G++AF
Sbjct: 886  YRQVRFYEGVVELSLTAAEKKDPQGLGLHFYKHGEPEEDIVGLQAF 931


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,863,007
Number of Sequences: 237096
Number of extensions: 2349783
Number of successful extensions: 5933
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5933
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11992411152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)