Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_J22
(810 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y14487-1|CAB54840.1| 347|Homo sapiens cytosolic serine hydroxym... 121 4e-27
Y14485-1|CAB54838.1| 483|Homo sapiens cytosolic serine hydroxym... 121 4e-27
L23928-3|AAA36019.1| 403|Homo sapiens serine hydroxymethyltrans... 121 4e-27
L23928-2|AAA36018.1| 444|Homo sapiens serine hydroxymethyltrans... 121 4e-27
L23928-1|AAA36020.1| 483|Homo sapiens serine hydroxymethyltrans... 121 4e-27
L11931-1|AAA63257.1| 483|Homo sapiens serine hydroxymethyltrans... 121 4e-27
BC038598-1|AAH38598.1| 483|Homo sapiens serine hydroxymethyltra... 121 4e-27
BC022874-1|AAH22874.1| 444|Homo sapiens serine hydroxymethyltra... 121 4e-27
BC007979-1|AAH07979.1| 483|Homo sapiens serine hydroxymethyltra... 121 4e-27
AK223552-1|BAD97272.1| 483|Homo sapiens serine hydroxymethyltra... 121 4e-27
U23143-1|AAA64572.1| 483|Homo sapiens mitochondrial serine hydr... 117 4e-26
L11932-1|AAA63258.1| 474|Homo sapiens serine hydroxymethyltrans... 117 4e-26
BT006866-1|AAP35512.1| 504|Homo sapiens serine hydroxymethyltra... 117 4e-26
BC044211-1|AAH44211.1| 504|Homo sapiens serine hydroxymethyltra... 117 4e-26
BC032584-1|AAH32584.1| 494|Homo sapiens SHMT2 protein protein. 117 4e-26
BC013677-1|AAH13677.1| 504|Homo sapiens serine hydroxymethyltra... 117 4e-26
BC011911-1|AAH11911.1| 504|Homo sapiens serine hydroxymethyltra... 117 4e-26
AK223555-1|BAD97275.1| 504|Homo sapiens serine hydroxymethyltra... 117 4e-26
BC091501-1|AAH91501.1| 480|Homo sapiens SHMT2 protein protein. 52 2e-06
Y14488-1|CAB54841.1| 129|Homo sapiens 14 kDa protein protein. 44 9e-04
AK055053-1|BAB70847.1| 135|Homo sapiens protein. 40 0.014
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 30 8.6
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 30 8.6
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 30 8.6
>Y14487-1|CAB54840.1| 347|Homo sapiens cytosolic serine
hydroxymethyltransferase protein.
Length = 347
Score = 121 bits (291), Expect = 4e-27
Identities = 62/129 (48%), Positives = 81/129 (62%)
Frame = +1
Query: 151 KLLNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPN 330
K+L L ++D E+++II KE +RQR GLE+IASENF S VL+ L SCL+NKYSEG P
Sbjct: 20 KMLAQPLKDSDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPG 79
Query: 331 QRYYGGNEYIDEIEILAQNRSLEAYRLKSGKMGASMFXHXQALRXTLPFXPALSNPXXGX 510
QRYYGG E+IDE+E L Q R+L+AY+L G ++ + AL P
Sbjct: 80 QRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPY-SGSPANFAVYTALVEPHGRI 138
Query: 511 XGLNFPXGG 537
GL+ P GG
Sbjct: 139 MGLDLPDGG 147
>Y14485-1|CAB54838.1| 483|Homo sapiens cytosolic serine
hydroxymethyltransferase protein.
Length = 483
Score = 121 bits (291), Expect = 4e-27
Identities = 62/129 (48%), Positives = 81/129 (62%)
Frame = +1
Query: 151 KLLNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPN 330
K+L L ++D E+++II KE +RQR GLE+IASENF S VL+ L SCL+NKYSEG P
Sbjct: 20 KMLAQPLKDSDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPG 79
Query: 331 QRYYGGNEYIDEIEILAQNRSLEAYRLKSGKMGASMFXHXQALRXTLPFXPALSNPXXGX 510
QRYYGG E+IDE+E L Q R+L+AY+L G ++ + AL P
Sbjct: 80 QRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPY-SGSPANFAVYTALVEPHGRI 138
Query: 511 XGLNFPXGG 537
GL+ P GG
Sbjct: 139 MGLDLPDGG 147
>L23928-3|AAA36019.1| 403|Homo sapiens serine
hydroxymethyltransferase protein.
Length = 403
Score = 121 bits (291), Expect = 4e-27
Identities = 62/129 (48%), Positives = 81/129 (62%)
Frame = +1
Query: 151 KLLNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPN 330
K+L L ++D E+++II KE +RQR GLE+IASENF S VL+ L SCL+NKYSEG P
Sbjct: 20 KMLAQPLKDSDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPG 79
Query: 331 QRYYGGNEYIDEIEILAQNRSLEAYRLKSGKMGASMFXHXQALRXTLPFXPALSNPXXGX 510
QRYYGG E+IDE+E L Q R+L+AY+L G ++ + AL P
Sbjct: 80 QRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPY-SGSPANFAVYTALVEPHGRI 138
Query: 511 XGLNFPXGG 537
GL+ P GG
Sbjct: 139 MGLDLPDGG 147
>L23928-2|AAA36018.1| 444|Homo sapiens serine
hydroxymethyltransferase protein.
Length = 444
Score = 121 bits (291), Expect = 4e-27
Identities = 62/129 (48%), Positives = 81/129 (62%)
Frame = +1
Query: 151 KLLNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPN 330
K+L L ++D E+++II KE +RQR GLE+IASENF S VL+ L SCL+NKYSEG P
Sbjct: 20 KMLAQPLKDSDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPG 79
Query: 331 QRYYGGNEYIDEIEILAQNRSLEAYRLKSGKMGASMFXHXQALRXTLPFXPALSNPXXGX 510
QRYYGG E+IDE+E L Q R+L+AY+L G ++ + AL P
Sbjct: 80 QRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPY-SGSPANFAVYTALVEPHGRI 138
Query: 511 XGLNFPXGG 537
GL+ P GG
Sbjct: 139 MGLDLPDGG 147
>L23928-1|AAA36020.1| 483|Homo sapiens serine
hydroxymethyltransferase protein.
Length = 483
Score = 121 bits (291), Expect = 4e-27
Identities = 62/129 (48%), Positives = 81/129 (62%)
Frame = +1
Query: 151 KLLNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPN 330
K+L L ++D E+++II KE +RQR GLE+IASENF S VL+ L SCL+NKYSEG P
Sbjct: 20 KMLAQPLKDSDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPG 79
Query: 331 QRYYGGNEYIDEIEILAQNRSLEAYRLKSGKMGASMFXHXQALRXTLPFXPALSNPXXGX 510
QRYYGG E+IDE+E L Q R+L+AY+L G ++ + AL P
Sbjct: 80 QRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPY-SGSPANFAVYTALVEPHGRI 138
Query: 511 XGLNFPXGG 537
GL+ P GG
Sbjct: 139 MGLDLPDGG 147
>L11931-1|AAA63257.1| 483|Homo sapiens serine
hydroxymethyltransferase protein.
Length = 483
Score = 121 bits (291), Expect = 4e-27
Identities = 62/129 (48%), Positives = 81/129 (62%)
Frame = +1
Query: 151 KLLNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPN 330
K+L L ++D E+++II KE +RQR GLE+IASENF S VL+ L SCL+NKYSEG P
Sbjct: 20 KMLAQPLKDSDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPG 79
Query: 331 QRYYGGNEYIDEIEILAQNRSLEAYRLKSGKMGASMFXHXQALRXTLPFXPALSNPXXGX 510
QRYYGG E+IDE+E L Q R+L+AY+L G ++ + AL P
Sbjct: 80 QRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPY-SGSPANFAVYTALVEPHGRI 138
Query: 511 XGLNFPXGG 537
GL+ P GG
Sbjct: 139 MGLDLPDGG 147
>BC038598-1|AAH38598.1| 483|Homo sapiens serine
hydroxymethyltransferase 1 (soluble) protein.
Length = 483
Score = 121 bits (291), Expect = 4e-27
Identities = 62/129 (48%), Positives = 81/129 (62%)
Frame = +1
Query: 151 KLLNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPN 330
K+L L ++D E+++II KE +RQR GLE+IASENF S VL+ L SCL+NKYSEG P
Sbjct: 20 KMLAQPLKDSDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPG 79
Query: 331 QRYYGGNEYIDEIEILAQNRSLEAYRLKSGKMGASMFXHXQALRXTLPFXPALSNPXXGX 510
QRYYGG E+IDE+E L Q R+L+AY+L G ++ + AL P
Sbjct: 80 QRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPY-SGSPANFAVYTALVEPHGRI 138
Query: 511 XGLNFPXGG 537
GL+ P GG
Sbjct: 139 MGLDLPDGG 147
>BC022874-1|AAH22874.1| 444|Homo sapiens serine
hydroxymethyltransferase 1 (soluble) protein.
Length = 444
Score = 121 bits (291), Expect = 4e-27
Identities = 62/129 (48%), Positives = 81/129 (62%)
Frame = +1
Query: 151 KLLNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPN 330
K+L L ++D E+++II KE +RQR GLE+IASENF S VL+ L SCL+NKYSEG P
Sbjct: 20 KMLAQPLKDSDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPG 79
Query: 331 QRYYGGNEYIDEIEILAQNRSLEAYRLKSGKMGASMFXHXQALRXTLPFXPALSNPXXGX 510
QRYYGG E+IDE+E L Q R+L+AY+L G ++ + AL P
Sbjct: 80 QRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPY-SGSPANFAVYTALVEPHGRI 138
Query: 511 XGLNFPXGG 537
GL+ P GG
Sbjct: 139 MGLDLPDGG 147
>BC007979-1|AAH07979.1| 483|Homo sapiens serine
hydroxymethyltransferase 1 (soluble) protein.
Length = 483
Score = 121 bits (291), Expect = 4e-27
Identities = 62/129 (48%), Positives = 81/129 (62%)
Frame = +1
Query: 151 KLLNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPN 330
K+L L ++D E+++II KE +RQR GLE+IASENF S VL+ L SCL+NKYSEG P
Sbjct: 20 KMLAQPLKDSDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPG 79
Query: 331 QRYYGGNEYIDEIEILAQNRSLEAYRLKSGKMGASMFXHXQALRXTLPFXPALSNPXXGX 510
QRYYGG E+IDE+E L Q R+L+AY+L G ++ + AL P
Sbjct: 80 QRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPY-SGSPANFAVYTALVEPHGRI 138
Query: 511 XGLNFPXGG 537
GL+ P GG
Sbjct: 139 MGLDLPDGG 147
>AK223552-1|BAD97272.1| 483|Homo sapiens serine
hydroxymethyltransferase 1 (soluble) isoform 1 variant
protein.
Length = 483
Score = 121 bits (291), Expect = 4e-27
Identities = 62/129 (48%), Positives = 81/129 (62%)
Frame = +1
Query: 151 KLLNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPN 330
K+L L ++D E+++II KE +RQR GLE+IASENF S VL+ L SCL+NKYSEG P
Sbjct: 20 KMLAQPLKDSDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPG 79
Query: 331 QRYYGGNEYIDEIEILAQNRSLEAYRLKSGKMGASMFXHXQALRXTLPFXPALSNPXXGX 510
QRYYGG E+IDE+E L Q R+L+AY+L G ++ + AL P
Sbjct: 80 QRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPY-SGSPANFAVYTALVEPHGRI 138
Query: 511 XGLNFPXGG 537
GL+ P GG
Sbjct: 139 MGLDLPDGG 147
>U23143-1|AAA64572.1| 483|Homo sapiens mitochondrial serine
hydroxymethyltransferase protein.
Length = 483
Score = 117 bits (282), Expect = 4e-26
Identities = 58/124 (46%), Positives = 80/124 (64%)
Frame = +1
Query: 166 NLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPNQRYYG 345
+L ++DPE+++++ +EKDRQ GLE+IASENF S L+ L SCL+NKYSEG P +RYYG
Sbjct: 27 SLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYG 86
Query: 346 GNEYIDEIEILAQNRSLEAYRLKSGKMGASMFXHXQALRXTLPFXPALSNPXXGXXGLNF 525
G E +DEIE+L Q R+LEA+ L + G ++ + L AL P GL+
Sbjct: 87 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPY-SGSPANLAVYTALLQPHDRIMGLDL 145
Query: 526 PXGG 537
P GG
Sbjct: 146 PDGG 149
>L11932-1|AAA63258.1| 474|Homo sapiens serine
hydroxymethyltransferase protein.
Length = 474
Score = 117 bits (282), Expect = 4e-26
Identities = 58/124 (46%), Positives = 80/124 (64%)
Frame = +1
Query: 166 NLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPNQRYYG 345
+L ++DPE+++++ +EKDRQ GLE+IASENF S L+ L SCL+NKYSEG P +RYYG
Sbjct: 18 SLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYG 77
Query: 346 GNEYIDEIEILAQNRSLEAYRLKSGKMGASMFXHXQALRXTLPFXPALSNPXXGXXGLNF 525
G E +DEIE+L Q R+LEA+ L + G ++ + L AL P GL+
Sbjct: 78 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPY-SGSPANLAVYTALLQPHDRIMGLDL 136
Query: 526 PXGG 537
P GG
Sbjct: 137 PDGG 140
>BT006866-1|AAP35512.1| 504|Homo sapiens serine
hydroxymethyltransferase 2 (mitochondrial) protein.
Length = 504
Score = 117 bits (282), Expect = 4e-26
Identities = 58/124 (46%), Positives = 80/124 (64%)
Frame = +1
Query: 166 NLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPNQRYYG 345
+L ++DPE+++++ +EKDRQ GLE+IASENF S L+ L SCL+NKYSEG P +RYYG
Sbjct: 48 SLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYG 107
Query: 346 GNEYIDEIEILAQNRSLEAYRLKSGKMGASMFXHXQALRXTLPFXPALSNPXXGXXGLNF 525
G E +DEIE+L Q R+LEA+ L + G ++ + L AL P GL+
Sbjct: 108 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPY-SGSPANLAVYTALLQPHDRIMGLDL 166
Query: 526 PXGG 537
P GG
Sbjct: 167 PDGG 170
>BC044211-1|AAH44211.1| 504|Homo sapiens serine
hydroxymethyltransferase 2 (mitochondrial) protein.
Length = 504
Score = 117 bits (282), Expect = 4e-26
Identities = 58/124 (46%), Positives = 80/124 (64%)
Frame = +1
Query: 166 NLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPNQRYYG 345
+L ++DPE+++++ +EKDRQ GLE+IASENF S L+ L SCL+NKYSEG P +RYYG
Sbjct: 48 SLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYG 107
Query: 346 GNEYIDEIEILAQNRSLEAYRLKSGKMGASMFXHXQALRXTLPFXPALSNPXXGXXGLNF 525
G E +DEIE+L Q R+LEA+ L + G ++ + L AL P GL+
Sbjct: 108 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPY-SGSPANLAVYTALLQPHDRIMGLDL 166
Query: 526 PXGG 537
P GG
Sbjct: 167 PDGG 170
>BC032584-1|AAH32584.1| 494|Homo sapiens SHMT2 protein protein.
Length = 494
Score = 117 bits (282), Expect = 4e-26
Identities = 58/124 (46%), Positives = 80/124 (64%)
Frame = +1
Query: 166 NLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPNQRYYG 345
+L ++DPE+++++ +EKDRQ GLE+IASENF S L+ L SCL+NKYSEG P +RYYG
Sbjct: 48 SLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYG 107
Query: 346 GNEYIDEIEILAQNRSLEAYRLKSGKMGASMFXHXQALRXTLPFXPALSNPXXGXXGLNF 525
G E +DEIE+L Q R+LEA+ L + G ++ + L AL P GL+
Sbjct: 108 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPY-SGSPANLAVYTALLQPHDRIMGLDL 166
Query: 526 PXGG 537
P GG
Sbjct: 167 PDGG 170
>BC013677-1|AAH13677.1| 504|Homo sapiens serine
hydroxymethyltransferase 2 (mitochondrial) protein.
Length = 504
Score = 117 bits (282), Expect = 4e-26
Identities = 58/124 (46%), Positives = 80/124 (64%)
Frame = +1
Query: 166 NLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPNQRYYG 345
+L ++DPE+++++ +EKDRQ GLE+IASENF S L+ L SCL+NKYSEG P +RYYG
Sbjct: 48 SLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYG 107
Query: 346 GNEYIDEIEILAQNRSLEAYRLKSGKMGASMFXHXQALRXTLPFXPALSNPXXGXXGLNF 525
G E +DEIE+L Q R+LEA+ L + G ++ + L AL P GL+
Sbjct: 108 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPY-SGSPANLAVYTALLQPHDRIMGLDL 166
Query: 526 PXGG 537
P GG
Sbjct: 167 PDGG 170
>BC011911-1|AAH11911.1| 504|Homo sapiens serine
hydroxymethyltransferase 2 (mitochondrial) protein.
Length = 504
Score = 117 bits (282), Expect = 4e-26
Identities = 58/124 (46%), Positives = 80/124 (64%)
Frame = +1
Query: 166 NLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPNQRYYG 345
+L ++DPE+++++ +EKDRQ GLE+IASENF S L+ L SCL+NKYSEG P +RYYG
Sbjct: 48 SLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYG 107
Query: 346 GNEYIDEIEILAQNRSLEAYRLKSGKMGASMFXHXQALRXTLPFXPALSNPXXGXXGLNF 525
G E +DEIE+L Q R+LEA+ L + G ++ + L AL P GL+
Sbjct: 108 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPY-SGSPANLAVYTALLQPHDRIMGLDL 166
Query: 526 PXGG 537
P GG
Sbjct: 167 PDGG 170
>AK223555-1|BAD97275.1| 504|Homo sapiens serine
hydroxymethyltransferase 2 (mitochondrial) variant
protein.
Length = 504
Score = 117 bits (282), Expect = 4e-26
Identities = 58/124 (46%), Positives = 80/124 (64%)
Frame = +1
Query: 166 NLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPNQRYYG 345
+L ++DPE+++++ +EKDRQ GLE+IASENF S L+ L SCL+NKYSEG P +RYYG
Sbjct: 48 SLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYG 107
Query: 346 GNEYIDEIEILAQNRSLEAYRLKSGKMGASMFXHXQALRXTLPFXPALSNPXXGXXGLNF 525
G E +DEIE+L Q R+LEA+ L + G ++ + L AL P GL+
Sbjct: 108 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPY-SGSPANLAVYTALLQPHDRIMGLDL 166
Query: 526 PXGG 537
P GG
Sbjct: 167 PDGG 170
>BC091501-1|AAH91501.1| 480|Homo sapiens SHMT2 protein protein.
Length = 480
Score = 52.4 bits (120), Expect = 2e-06
Identities = 28/69 (40%), Positives = 37/69 (53%)
Frame = +1
Query: 331 QRYYGGNEYIDEIEILAQNRSLEAYRLKSGKMGASMFXHXQALRXTLPFXPALSNPXXGX 510
QRYYGG E +DEIE+L Q R+LEA+ L + G ++ + L AL P
Sbjct: 79 QRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPY-SGSPANLAVYTALLQPHDRI 137
Query: 511 XGLNFPXGG 537
GL+ P GG
Sbjct: 138 MGLDLPDGG 146
>Y14488-1|CAB54841.1| 129|Homo sapiens 14 kDa protein protein.
Length = 129
Score = 43.6 bits (98), Expect = 9e-04
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +1
Query: 334 RYYGGNEYIDEIEILAQNRSLEAYRL 411
RYYGG E+IDE+E L Q R+L+AY+L
Sbjct: 65 RYYGGTEFIDELETLCQKRALQAYKL 90
>AK055053-1|BAB70847.1| 135|Homo sapiens protein.
Length = 135
Score = 39.5 bits (88), Expect = 0.014
Identities = 16/30 (53%), Positives = 26/30 (86%)
Frame = +1
Query: 166 NLWEADPELFDIIVKEKDRQRAGLEMIASE 255
+L ++DPE+++++ +EKDRQ GLE+IASE
Sbjct: 48 SLSDSDPEMWELLQREKDRQCRGLELIASE 77
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -3
Query: 553 PGGGXPPXRENLTPXXXPXGLTKPVXTAKXPGEPEXG*TLTPP 425
PGG PP TP P G P PG P G L PP
Sbjct: 223 PGGPPPPFPAGQTPPRPPLG---PPGPPGPPGPPPPGQVLPPP 262
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -3
Query: 553 PGGGXPPXRENLTPXXXPXGLTKPVXTAKXPGEPEXG*TLTPP 425
PGG PP TP P G P PG P G L PP
Sbjct: 223 PGGPPPPFPAGQTPPRPPLG---PPGPPGPPGPPPPGQVLPPP 262
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -3
Query: 553 PGGGXPPXRENLTPXXXPXGLTKPVXTAKXPGEPEXG*TLTPP 425
PGG PP TP P G P PG P G L PP
Sbjct: 223 PGGPPPPFPAGQTPPRPPLG---PPGPPGPPGPPPPGQVLPPP 262
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,888,298
Number of Sequences: 237096
Number of extensions: 2022701
Number of successful extensions: 3032
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3013
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10036353240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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