Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_J09
(908 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC8D2.18c |||adenosylhomocysteinase |Schizosaccharomyces pombe... 330 2e-91
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 27 3.7
SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces po... 27 3.7
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 27 4.9
SPAC9G1.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 4.9
SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 26 6.4
SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchang... 26 8.5
SPBC9B6.03 |||zinc finger protein|Schizosaccharomyces pombe|chr ... 26 8.5
>SPBC8D2.18c |||adenosylhomocysteinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 330 bits (810), Expect = 2e-91
Identities = 156/222 (70%), Positives = 182/222 (81%), Gaps = 1/222 (0%)
Frame = +2
Query: 206 YKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVLIET 385
YK+AD LA +GRKE+ +AE EMPGL+A R KYA ++ LKGARIAG LHMT+QTAVLIET
Sbjct: 6 YKVADISLAAFGRKELEIAENEMPGLIAVREKYAKSQPLKGARIAGCLHMTIQTAVLIET 65
Query: 386 LIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTL-IFPDGKP 562
L+ LGAEV WSS NIYSTQD AAAA+ A G+P++AWKGET++EY+WCIEQ L FP GKP
Sbjct: 66 LVALGAEVTWSSCNIYSTQDHAAAAIAATGVPVFAWKGETEEEYLWCIEQQLKSFPSGKP 125
Query: 563 LNMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVNDSV 742
LNMILDDGGDLT LVH ++P+LL D++GI+EETTTGVHNLYKMF+E LKVPAINVNDSV
Sbjct: 126 LNMILDDGGDLTALVHERHPELLVDIRGISEETTTGVHNLYKMFKENKLKVPAINVNDSV 185
Query: 743 TKANSTTCMDVGESLLDGIKRATDXMIAGKSCVXAGYGDXWK 868
TK+ ESL+DGIKRATD MIAGK V AG+GD K
Sbjct: 186 TKSKFDNLFGCKESLVDGIKRATDVMIAGKVAVVAGFGDVGK 227
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +3
Query: 15 RFXYRESLRFDSSKIRSVLCTRTRSTISSPNLFPGILIKITSKE---NSK*IYRRY 173
R+ RE F+ +I + L RT + ++ +FP ++ TSKE N+ YR +
Sbjct: 1921 RWERREISNFNYLQIVNTLAGRTYNDLTQYPVFPWVIADYTSKELDLNNPKTYRNF 1976
>SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 472
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = -2
Query: 337 YSGTFEYFSWSIFPTTCHKAWHFFLC*HNFFSAPFSQFLVSDFVRRLHFVVQSLIY 170
Y + ++W F T +K H+FL H + P + F+ F V S+++
Sbjct: 356 YDDWWNCWTWDQFARTWNKPVHYFLLRHVY--VPLNSFMSKSLSTFFTFFVSSVLH 409
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +2
Query: 623 DLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVNDSVTKANST 760
D+ ++ ET TG H++Y+ +K+P+ + V N T
Sbjct: 996 DINRESNSDNGETITGTHDVYRQTDNPEIKLPSDTASSKVDTHNPT 1041
>SPAC9G1.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 418
Score = 26.6 bits (56), Expect = 4.9
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -3
Query: 792 SSKDSPTSIQVVEFAFVTESLTLIAGTFKSPSRNILYKLCTPVVVSSV-IPFTSFKRSG 619
SS + S+ V E TLI F SPS ++ TP V+ S+ F + +R+G
Sbjct: 332 SSNLASASVDDVSEESQVEPNTLIFQNFSSPSTSLSAPKDTPAVIQSINTSFLNNERAG 390
>SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 674
Score = 26.2 bits (55), Expect = 6.4
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -3
Query: 696 RNILYKLCTPVVVSSVIPFTSFKRSGYLVWTKFVKSPPSSKIILRGF 556
RN+L++ CT + + F++ G L + K VK P + + + RGF
Sbjct: 282 RNLLFE-CTEQEL-----YNHFRQFGPLAYAKLVKDPATDRSLGRGF 322
>SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchange
factor Sec73 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +2
Query: 56 NTQRSVHANAFYNIKSQFISXYFNKNNLKRKQQVNLP 166
N+ S N FY I S YFN N QQ N P
Sbjct: 71 NSPSSKKKNIFYPIARAKHSFYFNHNWSSDLQQANSP 107
>SPBC9B6.03 |||zinc finger protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 293
Score = 25.8 bits (54), Expect = 8.5
Identities = 18/61 (29%), Positives = 25/61 (40%)
Frame = +1
Query: 247 RNYVSRERNARPYGMSSEICSS*NTQRCQNSRQLTHDSTNSGSY*DFNRIGSRGTMVQQ* 426
R+Y R ++PY S SS S ++ STNS N SR T + +
Sbjct: 90 RSYSGNPRLSKPYASSKLAASSRTASYQAMSYSVSPTSTNSSVATSLNYQSSRETGISKD 149
Query: 427 H 429
H
Sbjct: 150 H 150
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,689,152
Number of Sequences: 5004
Number of extensions: 78176
Number of successful extensions: 205
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 203
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 460503700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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