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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_J07
         (900 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024136-3|AAF35959.2|  470|Caenorhabditis elegans Hypothetical ...    42   5e-04
U50135-6|AAN63429.1|  925|Caenorhabditis elegans Hypothetical pr...    35   0.091
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction...    33   0.37 
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction...    33   0.37 
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction...    33   0.37 
U23484-9|AAC46771.1|  304|Caenorhabditis elegans Hypothetical pr...    32   0.64 
U28991-8|AAM22060.1|  517|Caenorhabditis elegans Hypothetical pr...    30   2.6  
U28991-7|AAK68312.1|  626|Caenorhabditis elegans Hypothetical pr...    30   2.6  
U28991-6|AAK68313.1|  624|Caenorhabditis elegans Hypothetical pr...    30   2.6  
AF068719-6|AAV58864.1|  457|Caenorhabditis elegans Uncoordinated...    29   3.4  
AF068719-5|AAC17781.1|  458|Caenorhabditis elegans Uncoordinated...    29   3.4  
AC024859-11|AAK29981.1|  933|Caenorhabditis elegans Hypothetical...    29   3.4  
AC024859-10|ABA00158.1|  832|Caenorhabditis elegans Hypothetical...    29   3.4  
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z46791-5|CAA86755.2|  948|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z96047-4|CAB09414.1|  796|Caenorhabditis elegans Hypothetical pr...    29   6.0  
Z72511-4|CAA96660.1|  395|Caenorhabditis elegans Hypothetical pr...    29   6.0  
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr...    29   6.0  
U50066-2|AAA93438.2|  202|Caenorhabditis elegans Hypothetical pr...    29   6.0  
AL132860-16|CAB60516.1|  497|Caenorhabditis elegans Hypothetical...    29   6.0  
AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical...    29   6.0  
U21309-1|AAN73881.2|  458|Caenorhabditis elegans Hypothetical pr...    28   7.9  
U13019-16|AAK84569.1|  311|Caenorhabditis elegans Serpentine rec...    28   7.9  
AL132860-5|CAB60515.1|  798|Caenorhabditis elegans Hypothetical ...    28   7.9  
AF045641-3|AAO91716.1|  368|Caenorhabditis elegans Hypothetical ...    28   7.9  
AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ...    28   7.9  
AF000298-11|AAM97960.1|  518|Caenorhabditis elegans Prion-like-(...    28   7.9  
AF000298-10|AAM97961.1|  539|Caenorhabditis elegans Prion-like-(...    28   7.9  
AF000298-8|AAC48255.2|  524|Caenorhabditis elegans Prion-like-(q...    28   7.9  

>AC024136-3|AAF35959.2|  470|Caenorhabditis elegans Hypothetical
           protein F54A3.6 protein.
          Length = 470

 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 26/86 (30%), Positives = 38/86 (44%)
 Frame = +1

Query: 124 SMTELVYQAGXLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTS 303
           S+ E VY      PP  G+   F + P  P +    VPP A S F    G +P  T+ T+
Sbjct: 313 SLKEQVYGKPNPPPPSAGY--FFQAPPPAPASSSSTVPP-AVSPFGVPLGAQPSTTSSTT 369

Query: 304 VATNGQSTPKESPEPQIQQETPAAAE 381
            ++N  S P   P P++    P   +
Sbjct: 370 YSSN-YSNPSYPPPPKVDLPPPGIVQ 394


>U50135-6|AAN63429.1|  925|Caenorhabditis elegans Hypothetical
           protein C52E12.1 protein.
          Length = 925

 Score = 34.7 bits (76), Expect = 0.091
 Identities = 23/77 (29%), Positives = 32/77 (41%)
 Frame = +1

Query: 160 RPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKES 339
           RP G G   +  +EP PP   R  +        ++ Q D  + T   S  + G  T   S
Sbjct: 358 RPIGRGR-GLRSNEPPPPPVPRERIAVVQRQVETNPQSDPSQFTTVRSAQSKGVFTSTRS 416

Query: 340 PEPQIQQETPAAAERAP 390
                QQE P+ A +AP
Sbjct: 417 AYTSNQQEFPSLAPQAP 433


>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
            molecule protein1, isoform c protein.
          Length = 1148

 Score = 32.7 bits (71), Expect = 0.37
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +1

Query: 202  PEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVAT-NGQSTPKESPEP 348
            P+  R  R     + TST+ +G G EP +T  T+    NG S+ +++P P
Sbjct: 1050 PDWYRENRPQGQTAQTSTYRYGNGVEPMSTTTTTTTVINGTSSHQQAPPP 1099


>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
            molecule protein1, isoform d protein.
          Length = 1439

 Score = 32.7 bits (71), Expect = 0.37
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +1

Query: 202  PEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVAT-NGQSTPKESPEP 348
            P+  R  R     + TST+ +G G EP +T  T+    NG S+ +++P P
Sbjct: 1009 PDWYRENRPQGQTAQTSTYRYGNGVEPMSTTTTTTTVINGTSSHQQAPPP 1058


>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
            molecule protein1, isoform a protein.
          Length = 1480

 Score = 32.7 bits (71), Expect = 0.37
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +1

Query: 202  PEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVAT-NGQSTPKESPEP 348
            P+  R  R     + TST+ +G G EP +T  T+    NG S+ +++P P
Sbjct: 1050 PDWYRENRPQGQTAQTSTYRYGNGVEPMSTTTTTTTVINGTSSHQQAPPP 1099


>U23484-9|AAC46771.1|  304|Caenorhabditis elegans Hypothetical
           protein EEED8.11 protein.
          Length = 304

 Score = 31.9 bits (69), Expect = 0.64
 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
 Frame = +1

Query: 142 YQAGXLRPPG---GGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVAT 312
           Y +G  RPP    GGH N  D   +PP++   + P ++TST +         T  T+  T
Sbjct: 28  YGSGGHRPPSSYHGGHHNDDDCTTKPPKS--TSTPSTSTSTPT--TTTTTTTTTTTTPTT 83

Query: 313 NGQSTPKESPEP 348
              +T   +PEP
Sbjct: 84  TTTTTTTTTPEP 95


>U28991-8|AAM22060.1|  517|Caenorhabditis elegans Hypothetical
           protein F08F8.9c protein.
          Length = 517

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +1

Query: 166 PGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPK-ESP 342
           P  G +N+F S      +      PS++S++       P   +  + A NG +TP+   P
Sbjct: 349 PTSGTSNVFPSYQTSEYSSFPNQTPSSSSSYQQSSQYTPMVPDLINQAINGYTTPQYNQP 408

Query: 343 EPQIQQE 363
             Q+ Q+
Sbjct: 409 NQQVNQD 415


>U28991-7|AAK68312.1|  626|Caenorhabditis elegans Hypothetical
           protein F08F8.9a protein.
          Length = 626

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +1

Query: 166 PGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPK-ESP 342
           P  G +N+F S      +      PS++S++       P   +  + A NG +TP+   P
Sbjct: 349 PTSGTSNVFPSYQTSEYSSFPNQTPSSSSSYQQSSQYTPMVPDLINQAINGYTTPQYNQP 408

Query: 343 EPQIQQE 363
             Q+ Q+
Sbjct: 409 NQQVNQD 415


>U28991-6|AAK68313.1|  624|Caenorhabditis elegans Hypothetical
           protein F08F8.9b protein.
          Length = 624

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +1

Query: 166 PGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPK-ESP 342
           P  G +N+F S      +      PS++S++       P   +  + A NG +TP+   P
Sbjct: 349 PTSGTSNVFPSYQTSEYSSFPNQTPSSSSSYQQSSQYTPMVPDLINQAINGYTTPQYNQP 408

Query: 343 EPQIQQE 363
             Q+ Q+
Sbjct: 409 NQQVNQD 415


>AF068719-6|AAV58864.1|  457|Caenorhabditis elegans Uncoordinated
           protein 23, isoform c protein.
          Length = 457

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +1

Query: 265 GQGDEPKATNGTSVATNGQSTP-KESPEPQIQQETPAAAERAPKADS 402
           GQ      +N +S   N ++ P ++ P+PQ QQ++    ++AP  ++
Sbjct: 11  GQNQSHSRSNSSSSVDNDRNQPPQQPPQPQPQQQSQQQYQQAPNVNT 57


>AF068719-5|AAC17781.1|  458|Caenorhabditis elegans Uncoordinated
           protein 23, isoform a protein.
          Length = 458

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +1

Query: 265 GQGDEPKATNGTSVATNGQSTP-KESPEPQIQQETPAAAERAPKADS 402
           GQ      +N +S   N ++ P ++ P+PQ QQ++    ++AP  ++
Sbjct: 12  GQNQSHSRSNSSSSVDNDRNQPPQQPPQPQPQQQSQQQYQQAPNVNT 58


>AC024859-11|AAK29981.1|  933|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.15a protein.
          Length = 933

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 16/63 (25%), Positives = 27/63 (42%)
 Frame = +1

Query: 178 HTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKESPEPQIQ 357
           H N    +P+PP       PP     +S     +  + +  SV  +G +TP    E +++
Sbjct: 433 HRNTLPLKPQPP-------PPQVYDIYSDPYNSDTSSHDSRSVTRSGSATPVIDRESRVR 485

Query: 358 QET 366
            ET
Sbjct: 486 MET 488


>AC024859-10|ABA00158.1|  832|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.15b protein.
          Length = 832

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 16/63 (25%), Positives = 27/63 (42%)
 Frame = +1

Query: 178 HTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKESPEPQIQ 357
           H N    +P+PP       PP     +S     +  + +  SV  +G +TP    E +++
Sbjct: 332 HRNTLPLKPQPP-------PPQVYDIYSDPYNSDTSSHDSRSVTRSGSATPVIDRESRVR 384

Query: 358 QET 366
            ET
Sbjct: 385 MET 387


>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
           protein C27H6.1 protein.
          Length = 1657

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 16/62 (25%), Positives = 26/62 (41%)
 Frame = +1

Query: 211 PRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKESPEPQIQQETPAAAERAP 390
           P   RR     + S F     ++     G  ++ +G++TP    E  I  E P   ++AP
Sbjct: 165 PSGRRRKTENMSYSEFYESMANQIPGGGGRRMSQSGRTTPLHDYEGDILDENPQYKDKAP 224

Query: 391 KA 396
            A
Sbjct: 225 PA 226


>Z46791-5|CAA86755.2|  948|Caenorhabditis elegans Hypothetical
           protein C09G5.6 protein.
          Length = 948

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 6/92 (6%)
 Frame = +1

Query: 112 STLASMTELVY-QAGXLRPPGGGHTNIFDSEPEPP---RT--GRRAVPPSATSTFSHGQG 273
           ST A+ TE    ++G       G  +    +PEPP   RT  G RA PP+ATST+    G
Sbjct: 98  STAATTTEAAEDESGYDFVNDNGPPSSRPRKPEPPTMPRTIQGFRAPPPAATSTYRPPHG 157

Query: 274 DEPKATNGTSVATNGQSTPKESPEPQIQQETP 369
                      ++     P++ P       +P
Sbjct: 158 SNYDNYGREPASSRRPYPPQQPPSTSAPHSSP 189


>Z96047-4|CAB09414.1|  796|Caenorhabditis elegans Hypothetical
           protein DY3.5 protein.
          Length = 796

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 16/71 (22%), Positives = 27/71 (38%)
 Frame = +1

Query: 178 HTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKESPEPQIQ 357
           H ++   +   P    + VPP + +T +  +G  P     + +A +    PK  P P   
Sbjct: 590 HGSVISQQQVVPPRPVQPVPPMSVATVT--RGPPPPTRPASVIAPSSSVVPKSQPRPSPT 647

Query: 358 QETPAAAERAP 390
              P  A   P
Sbjct: 648 TRPPTRATIRP 658


>Z72511-4|CAA96660.1|  395|Caenorhabditis elegans Hypothetical
           protein F55A11.7 protein.
          Length = 395

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
 Frame = +2

Query: 134 SSSIKQGCSAPLVVVTLTSSTPNRSHRGPAAVPFHQAQRALSATDKETSRK--RPTALQ* 307
           S +  + C  PLV V  T +  N +  G      HQ  R   AT +++  K  RP     
Sbjct: 84  SPNFVKPCQCPLVFVHTTCAIDNEAFFGTNCTQCHQMYRPEQATPRQSPTKTTRPVFTTK 143

Query: 308 RPT 316
            PT
Sbjct: 144 TPT 146


>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
           protein F26C11.3 protein.
          Length = 1317

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
 Frame = +1

Query: 172 GGH-TNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKESPEP 348
           GGH T+ F +  E P T   +   +ATST S        +   TS   NG +T   +  P
Sbjct: 423 GGHSTSTFGTTSETPET---STDFTATSTSSSSDSSTQSSNAQTSTIENGSTTTNFTSAP 479

Query: 349 QIQQETPA 372
                TPA
Sbjct: 480 S-TSSTPA 486


>U50066-2|AAA93438.2|  202|Caenorhabditis elegans Hypothetical
           protein T14A8.2 protein.
          Length = 202

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = +1

Query: 217 TGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKESPEPQIQQETPAAA 378
           +G   V  S+T+  S    DEPK    T   T  + TP  S EP++++  P  A
Sbjct: 101 SGEAPVDSSSTAPMS---SDEPKIEETTEETT--EETPVLSKEPEVEESKPIEA 149


>AL132860-16|CAB60516.1|  497|Caenorhabditis elegans Hypothetical
           protein Y56A3A.17b protein.
          Length = 497

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = +1

Query: 229 AVPPSATSTFSH--GQGDEPKATNGTSVATNGQSTPKESPEPQIQQETPAAAERAPK 393
           A P ++ S F+     GD+PK T   S  + G+   + S EP+    TP     +PK
Sbjct: 217 AAPSNSGSLFAFLGKDGDKPKETPKFSGFSFGKKPAEPSEEPKAADSTPKLTFGSPK 273


>AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical
           protein D1007.7 protein.
          Length = 988

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +1

Query: 142 YQAGXLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQG 273
           + AG   PP G       S P PPR G   +PP    +F  G+G
Sbjct: 751 FNAGAPPPPFGRGAGPMSSFPPPPRGGMHHMPP--PPSFRGGRG 792


>U21309-1|AAN73881.2|  458|Caenorhabditis elegans Hypothetical
           protein C13B9.2 protein.
          Length = 458

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +2

Query: 143 IKQGCSAPLVVVTLTSSTPNRSHRGPAAVPFHQAQR 250
           IK+GCS  L++  +  +       GP  +P HQ  +
Sbjct: 193 IKKGCSIALIISDVIGNPVELIASGPTVIPAHQQDK 228


>U13019-16|AAK84569.1|  311|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 6 protein.
          Length = 311

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = +1

Query: 508 LAVSLYNQIFD---FHLTHIMSQICIEAKFFLR 597
           LA+SL N  FD   + LT  + QIC    FFLR
Sbjct: 66  LALSLLNLFFDIFYYRLTLFVPQICESFSFFLR 98


>AL132860-5|CAB60515.1|  798|Caenorhabditis elegans Hypothetical
           protein Y56A3A.6 protein.
          Length = 798

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 19/49 (38%), Positives = 23/49 (46%)
 Frame = +1

Query: 208 PPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKESPEPQI 354
           PP T R + PPSATS+      DE   T G+ V T   +   E  E  I
Sbjct: 66  PPGTVRASFPPSATSSVVSDGSDE---TAGSVVVTRKSNIVLEDEESVI 111


>AF045641-3|AAO91716.1|  368|Caenorhabditis elegans Hypothetical
           protein F53H1.4c protein.
          Length = 368

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +1

Query: 253 TFSHGQGDEPKATNGTSVATNGQSTPKESPEPQIQQETPAAAERAPK 393
           +F    G+   ATN   +A    +TP +S E   + E   A  R PK
Sbjct: 5   SFGSEIGNMTAATNSNDIADVSLATPLKSTEQMEKSENGTAVSRLPK 51


>AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical
           protein F53H1.4a protein.
          Length = 1370

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +1

Query: 253 TFSHGQGDEPKATNGTSVATNGQSTPKESPEPQIQQETPAAAERAPK 393
           +F    G+   ATN   +A    +TP +S E   + E   A  R PK
Sbjct: 5   SFGSEIGNMTAATNSNDIADVSLATPLKSTEQMEKSENGTAVSRLPK 51


>AF000298-11|AAM97960.1|  518|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform b protein.
          Length = 518

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 19/69 (27%), Positives = 24/69 (34%)
 Frame = +1

Query: 163 PPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKESP 342
           PP GG        P PPR G    PP    +   G    P+A      A  G   P    
Sbjct: 283 PPAGG-------SPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQ 335

Query: 343 EPQIQQETP 369
           + Q  + +P
Sbjct: 336 KRQAPERSP 344


>AF000298-10|AAM97961.1|  539|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform c protein.
          Length = 539

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 19/69 (27%), Positives = 24/69 (34%)
 Frame = +1

Query: 163 PPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKESP 342
           PP GG        P PPR G    PP    +   G    P+A      A  G   P    
Sbjct: 304 PPAGG-------SPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQ 356

Query: 343 EPQIQQETP 369
           + Q  + +P
Sbjct: 357 KRQAPERSP 365


>AF000298-8|AAC48255.2|  524|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform a protein.
          Length = 524

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 19/69 (27%), Positives = 24/69 (34%)
 Frame = +1

Query: 163 PPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKESP 342
           PP GG        P PPR G    PP    +   G    P+A      A  G   P    
Sbjct: 289 PPAGG-------SPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQ 341

Query: 343 EPQIQQETP 369
           + Q  + +P
Sbjct: 342 KRQAPERSP 350


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,506,389
Number of Sequences: 27780
Number of extensions: 334647
Number of successful extensions: 1349
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1338
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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