Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_J06
(908 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1118 + 27756288-27756337,27756505-27756619,27756883-277570... 95 7e-20
01_06_0663 - 30991390-30992340 80 3e-15
05_07_0134 - 27911920-27912762 68 1e-11
02_04_0261 + 21363787-21363891,21364185-21364286,21365854-213659... 56 5e-08
06_01_1052 + 8312752-8312862,8312969-8313041,8313285-8313362,831... 54 2e-07
01_05_0431 - 22084474-22084635,22084740-22084844,22084931-220850... 38 0.008
06_01_0080 + 644021-645463 36 0.059
06_03_0219 - 18227559-18227858,18227864-18228340 35 0.10
02_01_0384 - 2781362-2782299,2782320-2782428 33 0.24
01_06_1467 + 37570289-37570771,37571818-37571892,37572006-37572266 31 1.3
02_02_0184 - 7581345-7581769,7581880-7582296,7582891-7583661,758... 29 3.9
06_02_0014 + 10585888-10586422,10586621-10586652,10587127-10587216 29 6.7
02_04_0463 + 23135732-23136888,23138956-23139333,23139506-23139530 28 8.9
>06_03_1118 +
27756288-27756337,27756505-27756619,27756883-27757033,
27757219-27757301,27757424-27757519,27757615-27757757,
27757858-27757942,27758158-27758237,27758335-27758422
Length = 296
Score = 95.1 bits (226), Expect = 7e-20
Identities = 63/184 (34%), Positives = 97/184 (52%), Gaps = 12/184 (6%)
Frame = +3
Query: 225 MAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSILTSNKVVLDVY 404
MA NLV G+ V +D +++ + + +G+ S ++L S+ VLDVY
Sbjct: 1 MARNLVMAGYKVTVHDVNENTMKKFSDDGIPTKLSPLEVSKSSDVVITMLPSSAHVLDVY 60
Query: 405 LGKDGVVAHAK-KGS-LLIDSSTIDPNVPKQIFP----IALEKGLGFT------DAPVSG 548
G++G++A+ G L IDSST+DP ++I L++ + DAPVSG
Sbjct: 61 NGRNGLLANGGCLGPWLYIDSSTVDPQTSRKISMDISRCTLKEKKAYAEKPMMLDAPVSG 120
Query: 549 GVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNXMLMGITGM 728
GV A+ L FM GG +E + + PLL MG K +CG G+G VAK+ N M M I+ +
Sbjct: 121 GVPAAEAGKLTFMVGGSEEAYLAAKPLLLSMGKKTIYCGGAGNGSVAKICNNMAMAISML 180
Query: 729 ATAD 740
++
Sbjct: 181 GVSE 184
Score = 49.6 bits (113), Expect = 3e-06
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = +1
Query: 751 MGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPXXPSXKNTMG 891
+G +G++ VL D+ N SSAR WS++ Y PVPG++ PS +N G
Sbjct: 188 LGQNLGIKASVLTDIFNCSSARCWSSDTYNPVPGVMMDVPSSRNYDG 234
>01_06_0663 - 30991390-30992340
Length = 316
Score = 79.8 bits (188), Expect = 3e-15
Identities = 58/185 (31%), Positives = 82/185 (44%), Gaps = 3/185 (1%)
Frame = +3
Query: 207 GNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSILTSNK 386
G MG MA +L+ G+ + Y+ + G T A S ++
Sbjct: 28 GVMGQSMAGHLLAAGYALTVYNRTASKAEGLVSRGATLAESPRAAAAAADVIFLMVGFPS 87
Query: 387 VVLDVYLGKD-GVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGA 563
V L G +A G LL+D +T DP + +I A K DAPVSGG GA
Sbjct: 88 DVRSTSLDPSTGALAGLAPGGLLVDMTTSDPTLAAEIAEAAAAKSCAAVDAPVSGGDRGA 147
Query: 564 QNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNXMLMGIT--GMATA 737
++ATL+ AGG R PL K+MG + G G+GQ AKL N + + T G+
Sbjct: 148 RSATLSIFAGGDAAVVARLAPLFKLMG-NALYMGGPGAGQRAKLGNQIAIASTMVGLVEG 206
Query: 738 DLHEH 752
++ H
Sbjct: 207 MVYAH 211
>05_07_0134 - 27911920-27912762
Length = 280
Score = 67.7 bits (158), Expect = 1e-11
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 1/160 (0%)
Frame = +3
Query: 225 MAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSILTSNKVVLDVY 404
MAA L+ GF V Y + A G + A S +++ + V V
Sbjct: 1 MAARLLAAGFAVTAYARTPAKAEALVAAGASLAGSPAAVAAACDVVFTMVGNPGDVRAVV 60
Query: 405 L-GKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNATLA 581
L GV+A + G +L+D ++ P++ +++ A G D+PVSGG +GA++ LA
Sbjct: 61 LDAASGVLAGLRPGGVLVDCTSSSPSLAREVAAAARAAGCYAVDSPVSGGDVGARDGALA 120
Query: 582 FMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTN 701
+AGG + PL +G + + G GSGQ +K+ N
Sbjct: 121 LLAGGDEAVVSWLAPLFAHLG-RPTYMGPPGSGQSSKIAN 159
>02_04_0261 +
21363787-21363891,21364185-21364286,21365854-21365964,
21366233-21366334,21366901-21367016,21367180-21367258,
21367347-21367517,21367617-21367712
Length = 293
Score = 55.6 bits (128), Expect = 5e-08
Identities = 27/69 (39%), Positives = 39/69 (56%)
Frame = +3
Query: 510 EKGLGFTDAPVSGGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVA 689
+KG F +APVSG A++ L +A G K ++ +P V+G K F G+IG+G
Sbjct: 110 QKGGAFVEAPVSGSKKPAEDGQLVILAAGDKVLYDDMVPAFDVLGKKSFFLGEIGNGAKM 169
Query: 690 KLTNXMLMG 716
KL M+MG
Sbjct: 170 KLVVNMIMG 178
>06_01_1052 +
8312752-8312862,8312969-8313041,8313285-8313362,
8313443-8313523,8313706-8313779,8313865-8313919,
8314031-8314079,8314222-8314359,8314455-8314536,
8315131-8315209,8315357-8315400,8315479-8315673,
8316110-8316185,8317427-8317507,8317623-8317703,
8318128-8318204,8318402-8318499,8318672-8318809,
8319397-8319478,8319564-8319642,8319885-8319931,
8320014-8320228,8320330-8320450,8320529-8320648,
8320731-8320849,8320964-8321036,8321112-8321231,
8321538-8321606,8321756-8321926,8322004-8322051,
8322192-8322333,8323244-8323341,8323684-8323828,
8323928-8324013,8324112-8324222,8324456-8324530,
8324836-8324901,8325036-8325224,8325315-8325425,
8326616-8326696,8327192-8327371
Length = 1385
Score = 54.0 bits (124), Expect = 2e-07
Identities = 55/188 (29%), Positives = 83/188 (44%), Gaps = 4/188 (2%)
Frame = +3
Query: 204 LGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSILTSN 383
LG MG MA++L+K GF+V YD K L G +S I+ +N
Sbjct: 331 LGAMGFGMASHLLKSGFSVIAYDVYKPTLARFTDLGGLTKDS-PEEVSKDVEILVIMVAN 389
Query: 384 KVVLD-VYLGKDGVVAHAKKGSLLIDSSTIDPN-VPKQIFPIALE-KGLGFTDAPVSGGV 554
+V + V G G V+ G+ +I SST+ P V K + E + + DAPVSGGV
Sbjct: 390 EVQAENVLYGNAGAVSVMAAGTSIILSSTVSPGFVIKLKERLEAECRDIKLVDAPVSGGV 449
Query: 555 MGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHC-GQIGSGQVAKLTNXMLMGITGMA 731
A TL +K + S+ + + K + G G+ K+ N +L G+ +
Sbjct: 450 KRAAEGTLT--TNMQKLVHDCSIFYVTALSEKLYVIKGGCGAASSVKMVNQLLAGVHIAS 507
Query: 732 TADLHEHG 755
A+ G
Sbjct: 508 AAEAMAFG 515
>01_05_0431 -
22084474-22084635,22084740-22084844,22084931-22085003,
22085109-22085179,22085429-22085548,22085631-22085715,
22085812-22085867,22085978-22086053,22086546-22086611,
22086843-22087060
Length = 343
Score = 38.3 bits (85), Expect = 0.008
Identities = 37/173 (21%), Positives = 63/173 (36%), Gaps = 2/173 (1%)
Frame = +3
Query: 204 LGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSILTSN 383
LG MG MA+NL+ G V ++ ++ + G S ++L
Sbjct: 58 LGIMGAPMASNLINAGCDVTVWNRTRSKCDPLLSLGAKYEPSPADVASSCDVTFAMLADP 117
Query: 384 KVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTD-APVSGGVMG 560
+ ++V G +G G +D ST+D K I G F + S +G
Sbjct: 118 ESAVEVACGANGAAQGMAPGKGYVDVSTVDAATSKLIGKHITSTGASFLERCDFSSCTVG 177
Query: 561 AQNATLAFMA-GGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNXMLMG 716
F + + ++ + + +F G +G G KL M+MG
Sbjct: 178 PMLTRYLFSRLQFQAQKSQQKMGCSSFLPQSRFFLGDVGKGADMKLVVNMVMG 230
>06_01_0080 + 644021-645463
Length = 480
Score = 35.5 bits (78), Expect = 0.059
Identities = 47/188 (25%), Positives = 77/188 (40%), Gaps = 14/188 (7%)
Frame = +3
Query: 180 TRMWLSSXLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPAN-SIXXXXXXXX 356
TR+ L+ L MG +A N+ +KGF + Y+ + ++ + N +
Sbjct: 4 TRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVQRAKVEGNLPVYGFHDPAS 62
Query: 357 XXXSILTSNKVVLDVYLGKD------GVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKG 518
SI V++ V G + AH ++G +ID ++ E+G
Sbjct: 63 FVNSIQKPRVVIMLVKAGAPVDQTIATLAAHLEQGDCIIDGGNEWYENTERREKAMEERG 122
Query: 519 LGFTDAPVSGGVMGAQNATLAFMAGGRKEDFERSLP-LLKV------MGAKQFHCGQIGS 677
L + VSGG GA+N + M GG E ++ LLKV G + G+ GS
Sbjct: 123 LLYLGMGVSGGEEGARNGP-SLMPGGSFEAYKYIEDILLKVAAQVPDSGPCVTYIGKGGS 181
Query: 678 GQVAKLTN 701
G K+ +
Sbjct: 182 GNFVKMVH 189
>06_03_0219 - 18227559-18227858,18227864-18228340
Length = 258
Score = 34.7 bits (76), Expect = 0.10
Identities = 25/74 (33%), Positives = 35/74 (47%)
Frame = -2
Query: 730 AIPVMPINMXLVSLATCPEPICPQWNCLAPITLRRGRDLSKSSLRPPAMKARVAF*APMT 551
++PV+PI++ V+L + P P C A T+RR S PP R+A P
Sbjct: 56 SLPVVPIHLP-VALLSLPRCRPPPAACAAS-TVRRPAAPSPPPASPPPPPPRLALRFPRR 113
Query: 550 PPDTGASVNPSPFS 509
PP+ PS FS
Sbjct: 114 PPELPPRRRPSRFS 127
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 33.5 bits (73), Expect = 0.24
Identities = 23/74 (31%), Positives = 30/74 (40%)
Frame = -2
Query: 694 SLATCPEPICPQWNCLAPITLRRGRDLSKSSLRPPAMKARVAF*APMTPPDTGASVNPSP 515
S A P P++ +T R LS ++ PA +R P +PP GAS P
Sbjct: 180 SSAIPPPATAPRFPPPRAMTARTALALSPTTSASPASPSRTRLAPPRSPPAGGASGAPRR 239
Query: 514 FSKAIGKICLGTFG 473
S A C G G
Sbjct: 240 SSSAASPSCAGVEG 253
>01_06_1467 + 37570289-37570771,37571818-37571892,37572006-37572266
Length = 272
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -2
Query: 865 PXAPVRGLDSTPRSTRSEPMSCSARPTEPSVRVPF*CPCSCRSAVAIPV 719
P +P R S P ST P+ A+P+ P VP P + ++V++P+
Sbjct: 40 PPSPPRA--SIPVSTSPAPLPAPAKPSLPGASVPIIVPQAPPASVSVPI 86
>02_02_0184 -
7581345-7581769,7581880-7582296,7582891-7583661,
7583894-7584437,7584794-7584961,7585019-7585101,
7585190-7585631
Length = 949
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 225 MAANLVKKGFTVRGYDPSKDALN 293
+A L+K+G RGYD SKD+ N
Sbjct: 251 VARRLLKQGLPFRGYDESKDSYN 273
>06_02_0014 + 10585888-10586422,10586621-10586652,10587127-10587216
Length = 218
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -3
Query: 438 FSHEPQRHLCPGTRRARLYCWSIWKRPRRLHQRLQQWSWL 319
F E + G A L WS W R R +H R Q W WL
Sbjct: 68 FMQEEGGKVFTGRMCATLPWWSTW-RGRWIHLRDQPWLWL 106
>02_04_0463 + 23135732-23136888,23138956-23139333,23139506-23139530
Length = 519
Score = 28.3 bits (60), Expect = 8.9
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = -2
Query: 661 QWNCLAPITLRRG-RDLSKSSLRPPAMKARVAF*APMTPPDTGASVNPSPFSKA 503
+W+ AP+ G R+ + L PP A P PP A PSPF A
Sbjct: 236 RWSRAAPLPPHNGERERPRLVLDPPKRDASAT---PTPPPAEAARSRPSPFGAA 286
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,390,584
Number of Sequences: 37544
Number of extensions: 647530
Number of successful extensions: 1895
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1891
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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