Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_J06
         (908 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81453-8|CAB03798.1|  299|Caenorhabditis elegans Hypothetical pr...   114   9e-26
AL031630-23|CAA21003.1|  299|Caenorhabditis elegans Hypothetical...   114   9e-26
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z99281-40|CAB16512.1|  268|Caenorhabditis elegans Hypothetical p...    31   1.5  
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr...    30   2.6  
AL032663-8|CAD89752.1|  321|Caenorhabditis elegans Hypothetical ...    29   4.6  
Z81097-15|CAB03172.1|  412|Caenorhabditis elegans Hypothetical p...    29   6.1  

>Z81453-8|CAB03798.1|  299|Caenorhabditis elegans Hypothetical
           protein B0250.5 protein.
          Length = 299

 Score =  114 bits (274), Expect = 9e-26
 Identities = 68/180 (37%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
 Frame = +3

Query: 204 LGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSILTSN 383
           LGNMGG MA NL+K G  +  YD +K  +      G   A              ++L S+
Sbjct: 9   LGNMGGHMARNLIKNGKKLIVYDVNKAVVQEFKAEGCEVAAHPADIAAASKEIITVLPSS 68

Query: 384 KVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGA 563
             V  VY G+ G+    + G+L +DSSTID  V  ++   A      + DAP+SGGV GA
Sbjct: 69  PHVKAVYQGEAGIFKTIQPGTLCMDSSTIDQIVSLEVAQAAALLKAEYIDAPISGGVTGA 128

Query: 564 QNATLAFMAG-GRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNXMLMGITGMATAD 740
           Q ATL FM G G    F+R+  +L +MG    + G +G+G  AK+ N ML+GI  +A A+
Sbjct: 129 QQATLTFMVGAGNDATFKRAEAVLSLMGKNIVNLGAVGNGTAAKICNNMLLGIQMVAVAE 188



 Score = 56.4 bits (130), Expect = 3e-08
 Identities = 23/49 (46%), Positives = 32/49 (65%)
 Frame = +1

Query: 745 MNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPXXPSXKNTMG 891
           MN+GI MGL+ K L  ++N SS R WS++ Y PVPG++   PS +   G
Sbjct: 190 MNLGISMGLDAKALAGIVNTSSGRCWSSDTYNPVPGVIENIPSCRGYAG 238


>AL031630-23|CAA21003.1|  299|Caenorhabditis elegans Hypothetical
           protein B0250.5 protein.
          Length = 299

 Score =  114 bits (274), Expect = 9e-26
 Identities = 68/180 (37%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
 Frame = +3

Query: 204 LGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSILTSN 383
           LGNMGG MA NL+K G  +  YD +K  +      G   A              ++L S+
Sbjct: 9   LGNMGGHMARNLIKNGKKLIVYDVNKAVVQEFKAEGCEVAAHPADIAAASKEIITVLPSS 68

Query: 384 KVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGA 563
             V  VY G+ G+    + G+L +DSSTID  V  ++   A      + DAP+SGGV GA
Sbjct: 69  PHVKAVYQGEAGIFKTIQPGTLCMDSSTIDQIVSLEVAQAAALLKAEYIDAPISGGVTGA 128

Query: 564 QNATLAFMAG-GRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNXMLMGITGMATAD 740
           Q ATL FM G G    F+R+  +L +MG    + G +G+G  AK+ N ML+GI  +A A+
Sbjct: 129 QQATLTFMVGAGNDATFKRAEAVLSLMGKNIVNLGAVGNGTAAKICNNMLLGIQMVAVAE 188



 Score = 56.4 bits (130), Expect = 3e-08
 Identities = 23/49 (46%), Positives = 32/49 (65%)
 Frame = +1

Query: 745 MNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPXXPSXKNTMG 891
           MN+GI MGL+ K L  ++N SS R WS++ Y PVPG++   PS +   G
Sbjct: 190 MNLGISMGLDAKALAGIVNTSSGRCWSSDTYNPVPGVIENIPSCRGYAG 238


>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
            W01F3.3 protein.
          Length = 2175

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 26/93 (27%), Positives = 37/93 (39%)
 Frame = -2

Query: 757  CPCSCRSAVAIPVMPINMXLVSLATCPEPICPQWNCLAPITLRRGRDLSKSSLRPPAMKA 578
            CP   RSA   P M  +    +   C E ICPQ     P  +  GR  +    +PPA  +
Sbjct: 970  CPPLDRSACRDPCMMFH----NRQGCEECICPQ-TAPTPPHVPTGRPTTVGQAQPPASSS 1024

Query: 577  RVAF*APMTPPDTGASVNPSPFSKAIGKICLGT 479
            R         P T  +  P+P S+   +  + T
Sbjct: 1025 RRVTEVGPPAPRTTEAAPPAPSSQPPRQFAVNT 1057


>Z99281-40|CAB16512.1|  268|Caenorhabditis elegans Hypothetical
           protein Y57G11C.11a protein.
          Length = 268

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 204 LGNMGGFMAANLVKKGFTVRGYDPSKDALNAA 299
           +G+ GG ++  L + GF V G D +K A+ AA
Sbjct: 82  VGSGGGLLSIPLARSGFDVTGIDATKQAVEAA 113


>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical protein
            C06B8.7 protein.
          Length = 3118

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -3

Query: 516  LSLRL*GRSVWEHSDLSYSNRSEAILFSHEPQRHLCPGTRRARL 385
            LS R     +W    ++++  SEA+++ H PQ  + PGT  A +
Sbjct: 1453 LSNRWNNEKIWLQK-VNFTRNSEAVMWLHSPQHAVVPGTPIAEI 1495


>AL032663-8|CAD89752.1|  321|Caenorhabditis elegans Hypothetical
           protein Y75B12B.10 protein.
          Length = 321

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +1

Query: 697 PXTC*WASPEWLQLICMNMGIKMGLEPKVLLDVLNNSSARSWS 825
           P  C W SPE+ + + +N  +    +   +L   N S++RS S
Sbjct: 276 PFICLWKSPEYQRAVKLNFALSTRNQQSTVLATQNYSNSRSSS 318


>Z81097-15|CAB03172.1|  412|Caenorhabditis elegans Hypothetical
           protein K07A1.11 protein.
          Length = 412

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 23/97 (23%), Positives = 39/97 (40%)
 Frame = -1

Query: 650 FSSHHFEERKGPFEVFFTTSGHEGQGSVLSTHDSSRYRCICESQPFL*GYREDLFGNIRI 471
           ++ H  E +   F       GHEG+G  +S  ++     +      +  +  D+  N  I
Sbjct: 149 YTKHPSEPKDTKFRPQLRLKGHEGEGYGMSWSNTREGHLLTAGDDGMICHW-DINANQTI 207

Query: 470 YRTRIDQKRSFFRMSHNAIFAQVHVEHDFIAGQYGND 360
               + Q + F   S NA     H  H+F+ G  G+D
Sbjct: 208 SGQIVPQSK-FKGHSSNAEDVSFHALHNFVFGSVGDD 243


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,872,878
Number of Sequences: 27780
Number of extensions: 495159
Number of successful extensions: 1452
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1447
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)