Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_J03
         (893 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC022267-1|AAH22267.1|  515|Homo sapiens male sterility domain c...    30   9.9  
AK027756-1|BAB55347.1|  515|Homo sapiens protein ( Homo sapiens ...    30   9.9  
AK001927-1|BAA91983.1|  515|Homo sapiens protein ( Homo sapiens ...    30   9.9  

>BC022267-1|AAH22267.1|  515|Homo sapiens male sterility domain
           containing 1 protein.
          Length = 515

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = -3

Query: 162 AYKNIXLVHVDSGVACCFVETFKIFGIIEQLEQR--DGFFPKILR 34
           AY N  L H+D  +  C VE  KI   +E L+    D   PK++R
Sbjct: 154 AYSNCNLKHIDEVIYPCPVEPKKIIDSLEWLDDAIIDEITPKLIR 198


>AK027756-1|BAB55347.1|  515|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14850 fis, clone PLACE1000636, weakly similar to
           MALE STERILITY PROTEIN 2. ).
          Length = 515

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = -3

Query: 162 AYKNIXLVHVDSGVACCFVETFKIFGIIEQLEQR--DGFFPKILR 34
           AY N  L H+D  +  C VE  KI   +E L+    D   PK++R
Sbjct: 154 AYSNCNLKHIDEVIYPCPVEPKKIIDSLEWLDDAIIDEITPKLIR 198


>AK001927-1|BAA91983.1|  515|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11065 fis, clone PLACE1004868, weakly similar to
           MALE STERILITY PROTEIN 2. ).
          Length = 515

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = -3

Query: 162 AYKNIXLVHVDSGVACCFVETFKIFGIIEQLEQR--DGFFPKILR 34
           AY N  L H+D  +  C VE  KI   +E L+    D   PK++R
Sbjct: 154 AYSNCNLKHIDEVIYPCPVEPKKIIDSLEWLDDAIIDEITPKLIR 198


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,296,321
Number of Sequences: 237096
Number of extensions: 2558199
Number of successful extensions: 5308
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5308
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)