Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_J01
(896 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 136 5e-33
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy... 130 3e-31
SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc... 103 3e-23
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc... 90 3e-19
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc... 89 1e-18
SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomy... 82 1e-16
SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase YakC|Schizo... 58 2e-09
SPCC737.06c |||glutamate-cysteine ligase regulatory subunit |Sch... 36 0.006
SPCC965.06 |||potassium channel subunit |Schizosaccharomyces pom... 36 0.008
SPAC9E9.11 |plr1|plr|pyridoxal reductase |Schizosaccharomyces po... 31 0.17
SPBC19G7.10c |||topoisomerase associated protein |Schizosaccharo... 29 0.68
SPAC17G8.13c |mst2||histone acetyltransferase Mst2|Schizosacchar... 28 1.6
SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyce... 28 2.1
SPAC1F5.03c |||FAD-dependent oxidoreductase |Schizosaccharomyces... 28 2.1
SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22... 27 2.7
SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||... 27 2.7
SPCC622.16c |epe1||Jmjc domain chromatin associated protein Epe1... 27 3.6
SPBC56F2.08c |||RNA-binding protein|Schizosaccharomyces pombe|ch... 27 3.6
SPCC417.05c |chr2|cfh2|chitin synthase regulatory factor |Schizo... 27 3.6
SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated heterochr... 27 3.6
SPBC1105.02c |lys4||homocitrate synthase |Schizosaccharomyces po... 26 6.3
SPAC3C7.14c |obr1|apt1, uhp1|ubiquitinated histone-like protein ... 26 8.4
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 136 bits (328), Expect = 5e-33
Identities = 78/218 (35%), Positives = 121/218 (55%), Gaps = 10/218 (4%)
Frame = +1
Query: 145 HYNXVRGGHXPVVALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTAYKYGIEDQ 324
++ G P + LGTW GK ++T+ AV AL+AGY HIDTA+ YG E +
Sbjct: 14 YFTLPNGDKIPSIGLGTWRS----GK-----DETKNAVCAALKAGYRHIDTAHIYGNEKE 64
Query: 325 VGRALTKKFSEGLKRESIFITTKLWNSYHEREQVIPALRKSLENLNLEYVDLYLIHWPIA 504
+G + + G+ R I++T+KLW + H V AL K+L++LNLEY+D YLIHWP A
Sbjct: 65 IGEGIRES---GVPRTDIWVTSKLWCNAHRAGLVPLALEKTLQDLNLEYIDAYLIHWPFA 121
Query: 505 MF----------ENDTLLDNVDFLDTWRGMIDAKKLGLTKSIGISNFNQEQIQRIIDSGL 654
+ + + + ++V +TW+ M + + G + IGISNFN E + R++
Sbjct: 122 LLSGPEELPRNEKGELIYEDVPIEETWQAMEELLETGKVRYIGISNFNNEYLDRVLKIAK 181
Query: 655 EKPSALQIELNLNLQQPELFKFCRENDIVVMAYTPFGS 768
KP+ Q+EL+ L Q E + ++ I V AY+P +
Sbjct: 182 VKPTIHQMELHPYLPQTEYLEKHKKLQIHVSAYSPLAN 219
>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 321
Score = 130 bits (313), Expect = 3e-31
Identities = 78/218 (35%), Positives = 116/218 (53%), Gaps = 10/218 (4%)
Frame = +1
Query: 145 HYNXVRGGHXPVVALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTAYKYGIEDQ 324
H+ G P + LGTW N T+ AV AL+ GY HID A YG ED+
Sbjct: 15 HFTLADGSKIPGLGLGTWRSE---------PNQTKNAVKTALQYGYRHIDAAAIYGNEDE 65
Query: 325 VGRALTKKFSEGLKRESIFITTKLWNSYHEREQVIPALRKSLENLNLEYVDLYLIHWPIA 504
VG + + G+ R+ I++T+KLW + H E V AL K+L++L L+Y+D YLIHWP++
Sbjct: 66 VGDGIKES---GVPRKDIWVTSKLWCNAHAPEAVPKALEKTLKDLKLDYLDEYLIHWPVS 122
Query: 505 M------FEND----TLLDNVDFLDTWRGMIDAKKLGLTKSIGISNFNQEQIQRIIDSGL 654
F D + + +TW+ M + G + IG+SNFN ++RI+
Sbjct: 123 FKTGEDKFPKDKDGNLIYEKNPIEETWKAMEKLLETGKVRHIGLSNFNDTNLERILKVAK 182
Query: 655 EKPSALQIELNLNLQQPELFKFCRENDIVVMAYTPFGS 768
KP+ Q+EL+ L Q E + ++ I V AY+PFG+
Sbjct: 183 VKPAVHQMELHPFLPQTEFVEKHKKLGIHVTAYSPFGN 220
>SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde
reductase AKR3C2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 284
Score = 103 bits (247), Expect = 3e-23
Identities = 66/203 (32%), Positives = 103/203 (50%), Gaps = 2/203 (0%)
Frame = +1
Query: 175 PVVALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTAYKYGIEDQVGRALTKKFS 354
P +GT L + KG++ + D+ V AL AG+ HID A YG E++VG AL +
Sbjct: 13 PAYGVGTALFKKEKGEINRTIVDS---VKNALAAGFIHIDCAEVYGNEEEVGVALKEA-- 67
Query: 355 EGLKRESIFITTKLWNSYHEREQVIPALRKSLENLNLEYVDLYLIHWPIAMFENDTLLDN 534
+ R +FIT+K+ H + + AL +SL L +Y+DLYL+H PI +E
Sbjct: 68 -NVPRSKLFITSKVM---HNVDNIPEALNESLRKLGTDYLDLYLLHSPIPFYEK-----K 118
Query: 535 VDFLDTWRGMIDAKKLGLTKSIGISNFNQEQIQRIIDSGLEKPSALQIELNLNLQQ--PE 708
+ + W+ M A GL S+G+SNF ++ ++ + P QIE + + +
Sbjct: 119 IPISEGWKAMETALGTGLVHSVGVSNFRIPDLEELLKTSTITPRVNQIEFHPQVYKAAKP 178
Query: 709 LFKFCRENDIVVMAYTPFGSLFR 777
L +FC+ I+V Y P L R
Sbjct: 179 LVEFCQSKGIIVEGYGPLSPLVR 201
>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 90.2 bits (214), Expect = 3e-19
Identities = 59/176 (33%), Positives = 93/176 (52%), Gaps = 2/176 (1%)
Frame = +1
Query: 238 NDTEQAVIYALEAGYTHIDTAYKYGIEDQVGRALTKKFSE-GLKRESIFITTKLWNSYHE 414
N+ V AL++GY HIDTA YG ED G+A+ + +KR IF+T+KL N +
Sbjct: 32 NECYGLVTQALDSGYRHIDTAAVYGNEDICGKAIVDWCEKNNVKRTDIFLTSKLANC-SD 90
Query: 415 REQVIPALRKSLENLNLEYVDLYLIHWPIAMFENDTLLDNVDFLDTWRGMIDAKKLGLTK 594
A+R SL +L Y+DL+LI P + +W+ M + G +
Sbjct: 91 YYSTRAAIRSSLHHLG-TYIDLFLIQSPAG--------GKKSRIASWKAMEEFVDSGDIR 141
Query: 595 SIGISNFNQEQIQRIIDSGLE-KPSALQIELNLNLQQPELFKFCRENDIVVMAYTP 759
S+G+SN+ + +Q + S + P QIEL+ L Q ++ K+C+ +DI + AY+P
Sbjct: 142 SVGVSNYGVKHLQELYASNPKFYPCVNQIELHPFLSQDDIVKYCQSHDIAIEAYSP 197
>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 275
Score = 88.6 bits (210), Expect = 1e-18
Identities = 56/171 (32%), Positives = 88/171 (51%), Gaps = 2/171 (1%)
Frame = +1
Query: 253 AVIYALEAGYTHIDTAYKYGIEDQVGRALTKKFSE-GLKRESIFITTKLWNSYHEREQVI 429
+V AL+ GY HID+A Y E GRA+ K E G KRE I+ T+KL N + +
Sbjct: 32 SVYAALQCGYRHIDSAQMYHNEADCGRAILKFMEETGTKREDIWFTSKL-NDLSGYKSTL 90
Query: 430 PALRKSLENLNLEYVDLYLIHWPIAMFENDTLLDNVDFLDTWRGMIDAKKLGLTKSIGIS 609
++ S++ L Y+DL+L+H P D +++W+ + + G ++IG+S
Sbjct: 91 SSIDASVKACGLGYIDLFLLHSPYG-----------DRIESWKALEKGVEEGKLRAIGVS 139
Query: 610 NFNQEQIQRIIDSGLE-KPSALQIELNLNLQQPELFKFCRENDIVVMAYTP 759
NF IQ ++DS + P QIEL+ Q ++ +C I + AY P
Sbjct: 140 NFGPHHIQELLDSHPKIIPCVNQIELHPFCSQQKVVDYCESKGIQLAAYAP 190
>SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 276
Score = 81.8 bits (193), Expect = 1e-16
Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 5/189 (2%)
Frame = +1
Query: 241 DTEQAVIYALEAGYTHIDTAYKYGIEDQVGRALTKKFSEG--LKRESIFITTKLWNSYHE 414
D Q VI AL G ID+A Y E + +A+ + +KRE I + TK+ +S
Sbjct: 25 DCYQQVIEALSLGIRVIDSAITYRNEKECEQAIQDFCHQNVNIKREDITLITKIPDSLQG 84
Query: 415 REQVIPALRKSLENLNLEYVDLYLIH---WPIAMFENDTLLDNVDFLDTWRGMIDAKKLG 585
E+ A+ +SL +D+ LIH WP+ E+ WR ++ +K G
Sbjct: 85 FERTWKAVEQSLRRTGRPKLDVVLIHSPKWPVRRIES------------WRALLQHQKEG 132
Query: 586 LTKSIGISNFNQEQIQRIIDSGLEKPSALQIELNLNLQQPELFKFCRENDIVVMAYTPFG 765
IG+SN+N ++ II GL P+ Q+E + +P +C + I+V A++P
Sbjct: 133 RINKIGVSNYNIHHLEEIISLGLPLPAINQVEFSAFNNRPTFLSYCFNHGILVQAFSPLT 192
Query: 766 SLFRASSTR 792
+R S R
Sbjct: 193 RGYRLSDIR 201
>SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase
YakC|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 58.0 bits (134), Expect = 2e-09
Identities = 54/199 (27%), Positives = 101/199 (50%), Gaps = 19/199 (9%)
Frame = +1
Query: 235 TNDTEQAVI-YALEAGYTHIDTAYKYGI---EDQVGRALTKKFSEGLKRESIFITTKLW- 399
+ + QAV+ +A + G T D++ YG E+ +GR F + +R+ IF+ TK
Sbjct: 31 SEEANQAVLTHAADLGCTFWDSSDMYGFGANEECIGRW----FKQTGRRKEIFLATKFGY 86
Query: 400 ---------NSYHEREQVIPALRKSLENLNLEYVDLYLIHWPIAMFENDTLLDNVDFLDT 552
+ +E + + AL SL+ L ++ +DLY +H F +T ++ + +
Sbjct: 87 EKNPETGELSLNNEPDYIEKALDLSLKRLGIDCIDLYYVH----RFSGETPIEKI--MGA 140
Query: 553 WRGMIDAKKLGLTKSIGISNFNQEQIQRIIDSGLEKPSALQIE---LNLNLQQPEL--FK 717
+ ++A K+ + IG+S + I+R + + SA+Q+E +L +++PE+ K
Sbjct: 141 LKKCVEAGKI---RYIGLSECSANTIRRA--AAVYPVSAVQVEYSPFSLEIERPEIGVMK 195
Query: 718 FCRENDIVVMAYTPFGSLF 774
CREN+I ++ Y P G F
Sbjct: 196 ACRENNITIVCYAPLGRGF 214
>SPCC737.06c |||glutamate-cysteine ligase regulatory subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 287
Score = 36.3 bits (80), Expect = 0.006
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +1
Query: 541 FLDTWRGMIDAKKLGLTKSIGISNFNQEQIQRIIDSGLEKPSALQIELNLNLQQP-ELFK 717
++DTW+ + + G ++G+S F ++QR+I S P + QI + N + P +L
Sbjct: 158 WVDTWKLLEEKVGEGKIGTLGVSEFGVNELQRLISSVNVVPESTQINIGQNCKLPNDLLN 217
Query: 718 FCRENDIVVMAYTPFGSLFRAS 783
F + + + ++ +L S
Sbjct: 218 FADRHHLKLFFHSDPSALLSES 239
>SPCC965.06 |||potassium channel subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 35.9 bits (79), Expect = 0.008
Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 9/114 (7%)
Frame = +1
Query: 184 ALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTA--YKYGIEDQV-GRALTK--- 345
+LG WL + +G V+ T+ + A + G DTA Y G + V G+A+ +
Sbjct: 29 SLGGWLTYGNEGYDVE---HTKNCLKQAWDLGINTFDTAEIYSNGNSETVMGKAIKELGW 85
Query: 346 KFSEGLKRESIFIT--TKLWNSYH-EREQVIPALRKSLENLNLEYVDLYLIHWP 498
SE + +F TKL N+ R+ +I L SL+ L L YVD+ + H P
Sbjct: 86 DRSEYVITTKVFFGAGTKLPNTTGLSRKHIIEGLNASLKRLGLPYVDVIMAHRP 139
>SPAC9E9.11 |plr1|plr|pyridoxal reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 333
Score = 31.5 bits (68), Expect = 0.17
Identities = 19/76 (25%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Frame = +1
Query: 544 LDTWRGMIDAKKLGLTKSIGISNFNQEQIQRIIDSGLEKPSALQIELNL---NLQQPELF 714
+ T +G +D+ K+ +G+S + E I+R + +A+++E +L +++ +
Sbjct: 135 MKTLKGFVDSGKISC---VGLSEVSAETIKRA--HAVVPIAAVEVEYSLFSRDIETNGIM 189
Query: 715 KFCRENDIVVMAYTPF 762
CR+ I ++AY+PF
Sbjct: 190 DICRKLSIPIIAYSPF 205
>SPBC19G7.10c |||topoisomerase associated protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 744
Score = 29.5 bits (63), Expect = 0.68
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 541 FLDTWRGMIDAKKLGLTKSIGISNFNQEQIQRIIDSGLEKPSALQIEL 684
F+ T+ G + ++ G + Q+Q+QR++ S E+P A Q+ L
Sbjct: 364 FIQTYLGPSNNRRRGRRSENPMQKL-QQQLQRLVSSAKERPKATQLSL 410
>SPAC17G8.13c |mst2||histone acetyltransferase
Mst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 407
Score = 28.3 bits (60), Expect = 1.6
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +1
Query: 337 LTKKFSEGLKRESIFITTKLWNSYHEREQVIPALRKSLENLNLEYVDLYLIHWPIAM-FE 513
L KK+ LKR+ + K WN H ++V P L + L E + L+ I +
Sbjct: 335 LKKKYVLQLKRDELENVYKAWNIKHP-QRVNPKLLRWTPYLGEEQISNLLLKENILIPLP 393
Query: 514 NDTLLDNVDFLDT 552
LLDN LD+
Sbjct: 394 QKRLLDNSHHLDS 406
>SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1242
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 337 LTKKFSEGLKRESIFITTKLWNSYHEREQVIPALRKSLENLNLEYVDLYLIH 492
L +K + LK+ IF T L ++ ++P + K + NLN + D Y IH
Sbjct: 77 LCRKLASTLKQRVIFFTRVLL-TFFCWTVLLPLIFKHVWNLNFKIGDTYTIH 127
>SPAC1F5.03c |||FAD-dependent oxidoreductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 382
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 714 QVLPRKRHSGDGVHSLRVAVPSKLN 788
Q++P R SG +HS+ + +P KLN
Sbjct: 216 QLIPNLRISGARIHSITIDLPIKLN 240
>SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 27.5 bits (58), Expect = 2.7
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Frame = +1
Query: 475 DLYLIHWPIAMFENDTLLDNVDFLDTWRGMID--AKKLGLTKSIGI--SNFNQEQIQRII 642
+LY+ H + F +L+N++ LD MI + GL + + SN Q I
Sbjct: 219 ELYVSHNGLTSFSGIEVLENLEILDVSNNMIKHLSYLAGLKNLVELWASNNELSSFQEIE 278
Query: 643 D--SGLEKPSALQIELN-LNLQQPELFK 717
D SGL+K + E N L P +++
Sbjct: 279 DELSGLKKLETVYFEGNPLQKTNPAVYR 306
>SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1260
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 593 LVRPSFLASIIPRHVSRKSTLSSKVSFSNI 504
L+ PSF A I RHV + T S+ V N+
Sbjct: 698 LIEPSFTAKIFARHVLLEKTKSTLVVKKNV 727
>SPCC622.16c |epe1||Jmjc domain chromatin associated protein
Epe1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 948
Score = 27.1 bits (57), Expect = 3.6
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 655 EKPSALQIELNLNLQQPELFKFCRENDI 738
EKP ++ L N+Q E+ + R+ND+
Sbjct: 852 EKPDTTKVPLKYNIQHEEMKAYRRKNDL 879
>SPBC56F2.08c |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 661
Score = 27.1 bits (57), Expect = 3.6
Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Frame = +1
Query: 415 REQVIPALRKSLENLNLEYVDLYLIHWPIAMFENDTLLDNVDFLDTWRG-MIDAKKLG-L 588
R ++ R+ +NL+ VD + A+ N + + ++T R +A KL +
Sbjct: 115 RVDILEVARQFEMRINLDIVDSMIAS---AIENNKVATEILPPVETLRSRQFEASKLREI 171
Query: 589 TKSIGISNFNQEQIQRIIDSGLEKPSALQIELNLNLQQPELFKFCRE 729
K+I + QE+I+ I S L+ + L + N + F++C +
Sbjct: 172 RKNIDSGFYTQEEIEVIARSMLDDVAELSSDYLGNTVVQKFFEYCSD 218
>SPCC417.05c |chr2|cfh2|chitin synthase regulatory factor
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 512
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 238 NDTEQAVIYALEAGYTHIDTAYKYGIEDQVGRALTKKFSEGL 363
N+ E +Y + A H+ AY+ I Q+G +T+ E +
Sbjct: 244 NEKEAYRLYKMAADLNHVQAAYRVAICLQMGFGVTQNTEEAI 285
>SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1015
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/50 (24%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +1
Query: 409 HEREQVIPALRKSLENLNLEYVDLYLIHWP--IAMFENDTLLDNVDFLDT 552
H+++++I + + N NLE+V L +H I + ++L +N +++ +
Sbjct: 482 HKKQRLIKQITNIMHNFNLEFVTLSYLHSKGIITTSQLESLRNNTEWISS 531
>SPBC1105.02c |lys4||homocitrate synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 418
Score = 26.2 bits (55), Expect = 6.3
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +1
Query: 238 NDTEQAVIYA---LEAGYTHIDTAYKYGIEDQVG 330
NDT A+ A LEAG THIDT+ GI ++ G
Sbjct: 227 NDTGMAIANAYCALEAGATHIDTSI-LGIGERNG 259
>SPAC3C7.14c |obr1|apt1, uhp1|ubiquitinated histone-like protein
Uhp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 202
Score = 25.8 bits (54), Expect = 8.4
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 235 TNDTEQAVIYALEAGYTHIDTAYKYGIEDQVGRALTKKFSEGLKRE 372
T +T VIY+ + A K GIE G+A+ +F E L E
Sbjct: 3 TANTVAIVIYSTYGHVVKLAEAEKAGIEKAGGKAVIYQFPETLSPE 48
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,570,679
Number of Sequences: 5004
Number of extensions: 75131
Number of successful extensions: 272
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 260
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 452494940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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