Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_I23
(930 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_03_0210 + 15470680-15470715,15473088-15473342,15473417-154734... 63 3e-10
07_03_1305 - 25638531-25638584,25638909-25638990,25639087-256391... 62 5e-10
02_05_1031 - 33626527-33626580,33627482-33627563,33628892-33628911 58 8e-09
04_04_0390 - 24882572-24882577,24882928-24883009,24883089-248832... 44 2e-04
04_04_1615 + 34793511-34793660,34794013-34794070,34794163-347944... 31 0.99
09_06_0272 - 21962495-21962524,21962742-21962918 31 1.7
05_05_0223 - 23406814-23407477,23407597-23407919 31 1.7
07_01_0408 - 3137705-3138017,3139361-3139371,3140693-3140770,314... 30 2.3
04_04_0293 - 24189344-24189350,24189804-24190026,24190411-241905... 30 2.3
04_02_0017 - 8572400-8572732,8572818-8572919,8573138-8573230,857... 29 7.0
03_02_0602 + 9759055-9759223,9759305-9759455,9759548-9759593,975... 29 7.0
05_01_0431 + 3412178-3412336,3413012-3413109,3413185-3413312,341... 28 9.2
>03_03_0210 +
15470680-15470715,15473088-15473342,15473417-15473499,
15473617-15473698,15474886-15474939
Length = 169
Score = 62.9 bits (146), Expect = 3e-10
Identities = 31/76 (40%), Positives = 39/76 (51%)
Frame = +2
Query: 143 KSPADLKTAPFDPRXPXTKIRRGTATKVTWTSTVCQKVRGEKYEPCYYFKRVYRSLCPNE 322
K ++TAP D R P T R T+ C +GE C F + YRSLCP E
Sbjct: 93 KPEIKIETAPADFRFPTTNQTRHCFTRYVEYHR-CVAAKGEDAPECDKFAKYYRSLCPGE 151
Query: 323 WVDKWDNQRAEGTFAG 370
WV++W+ QR GTF G
Sbjct: 152 WVERWNEQRENGTFPG 167
>07_03_1305 -
25638531-25638584,25638909-25638990,25639087-25639169,
25639252-25639515,25639984-25640060,25640183-25640277,
25640953-25641065
Length = 255
Score = 62.5 bits (145), Expect = 5e-10
Identities = 30/76 (39%), Positives = 40/76 (52%)
Frame = +2
Query: 143 KSPADLKTAPFDPRXPXTKIRRGTATKVTWTSTVCQKVRGEKYEPCYYFKRVYRSLCPNE 322
K ++TAP D R P T R T+ C +GE C F + YRSLCP+E
Sbjct: 179 KPEIKIETAPADFRFPTTNQTRHCFTRYIEYHR-CVAAKGEGAPECEKFAKYYRSLCPSE 237
Query: 323 WVDKWDNQRAEGTFAG 370
W+++W+ QR GTF G
Sbjct: 238 WIERWNEQRENGTFPG 253
>02_05_1031 - 33626527-33626580,33627482-33627563,33628892-33628911
Length = 51
Score = 58.4 bits (135), Expect = 8e-09
Identities = 21/42 (50%), Positives = 29/42 (69%)
Frame = +2
Query: 245 CQKVRGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAG 370
C + +GE + C + + YRSLCP EW+++W QRA GTFAG
Sbjct: 8 CIEAKGEGSDECTKYAKCYRSLCPGEWIERWKEQRANGTFAG 49
>04_04_0390 -
24882572-24882577,24882928-24883009,24883089-24883200,
24883411-24883441
Length = 76
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/57 (40%), Positives = 28/57 (49%)
Frame = +2
Query: 155 DLKTAPFDPRXPXTKIRRGTATKVTWTSTVCQKVRGEKYEPCYYFKRVYRSLCPNEW 325
++KTAP D R P T R T+ C +GE C F + YRSLCP EW
Sbjct: 20 EIKTAPADFRFPTTNQTRHCFTRYIEYHR-CVNAKGEATADCEKFAKYYRSLCPAEW 75
>04_04_1615 +
34793511-34793660,34794013-34794070,34794163-34794410,
34794485-34794601,34795309-34795369,34795860-34795954,
34796048-34796122,34796316-34796401,34796529-34796578,
34796667-34796707,34796784-34796948,34797204-34797271,
34797362-34797422,34797878-34798393
Length = 596
Score = 31.5 bits (68), Expect = 0.99
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +3
Query: 219 PKLRGLPPFARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPSPVGFRS*T 389
P + GLPP + + +SH + R+ + LSAP S S G ++ S GF S T
Sbjct: 519 PGVVGLPPL-HSVSTQGSSHPMLQRQASSLSAPSSPSPRG-GGMTRSMSMPGFASLT 573
>09_06_0272 - 21962495-21962524,21962742-21962918
Length = 68
Score = 30.7 bits (66), Expect = 1.7
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -2
Query: 383 GSKSYRRRCLRRAGCPTCRPTHWGRET 303
G +R++ G P CRP HW R T
Sbjct: 11 GGGDFRQKVWSMTGGPYCRPVHWRRNT 37
>05_05_0223 - 23406814-23407477,23407597-23407919
Length = 328
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 255 FAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPS 365
FA+ N A++S C+G A + TS +S P+AP+
Sbjct: 219 FASSNGGDASVSWPCSGDDAQNNSETSHESSPPEAPA 255
>07_01_0408 -
3137705-3138017,3139361-3139371,3140693-3140770,
3141105-3141206,3141309-3141380,3141484-3141558
Length = 216
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 213 LLPKLRGLPPFARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPSP 368
L+P +RG PF+ AA + +T +R + L+ +S T SA + P
Sbjct: 40 LVPVIRGATPFSSAVAAAAAAASTPARSSSALTQTLSFPIQATRSAATSTPP 91
>04_04_0293 -
24189344-24189350,24189804-24190026,24190411-24190529,
24191331-24191578
Length = 198
Score = 30.3 bits (65), Expect = 2.3
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +3
Query: 189 P*PKSDEALLPKLRGLPPFARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPSP 368
P PK+ P + P A A K T+ A + + T +AP S + S +P+APSP
Sbjct: 18 PAPKATAPAGPARKA--PAAAGPAPKATAPAGPAPKATATAAPSSKAPSPAAPSPEAPSP 75
Query: 369 V 371
V
Sbjct: 76 V 76
>04_02_0017 -
8572400-8572732,8572818-8572919,8573138-8573230,
8573391-8573519,8573781-8574025,8574184-8574453,
8574590-8574752,8575965-8576063
Length = 477
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = -2
Query: 431 DLIKTNRNKLKHRERLGSKSYR 366
+L KTNR+K+K+ GS+SY+
Sbjct: 306 ELNKTNRSKVKYHHTTGSRSYK 327
>03_02_0602 +
9759055-9759223,9759305-9759455,9759548-9759593,
9759974-9760033,9760519-9760555,9761268-9761347,
9761413-9761516,9761613-9761673,9762962-9763019,
9763866-9763918,9764357-9765320,9766131-9766185,
9767223-9768786
Length = 1133
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +2
Query: 764 GHXRGKXGXVLGALPVPXSXTPXXRSFGXGNGFXSL 871
GH RG V A VP T RSFG + F +L
Sbjct: 595 GHVRGNVAAVKAAQIVPTQCTDGLRSFGSPHHFTNL 630
>05_01_0431 +
3412178-3412336,3413012-3413109,3413185-3413312,
3413770-3413881,3414309-3414489,3414714-3414896,
3415133-3415315,3416062-3416131,3416413-3416522,
3416604-3416908,3417079-3417175,3417622-3417765,
3418217-3418303,3418387-3418473,3418566-3418706,
3418805-3418930,3419166-3419264,3419690-3419757,
3420275-3420341,3420713-3420883,3420959-3421048,
3421831-3421911,3423397-3423470,3423784-3423855,
3423925-3424017,3424138-3424204
Length = 1030
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = +2
Query: 284 YFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI*ILNVPD 397
+F R ++ L PNEW++ ++ + +G + L++ D
Sbjct: 879 HFLRGFQQLIPNEWINMFNEHEFQVLISGSLESLDIDD 916
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,845,967
Number of Sequences: 37544
Number of extensions: 394697
Number of successful extensions: 995
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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