Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_I23
         (930 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024859-18|AAK29974.1|  121|Caenorhabditis elegans Hypothetical...    57   2e-08
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p...    33   0.38 
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p...    33   0.38 
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr...    33   0.38 
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr...    33   0.38 
AC024777-4|AAF60561.3|  627|Caenorhabditis elegans Hypothetical ...    30   2.7  
Z78418-3|CAB01697.1|  932|Caenorhabditis elegans Hypothetical pr...    29   3.6  
AF039718-5|AAP68905.1|  760|Caenorhabditis elegans Prion-like-(q...    29   6.3  
AF039718-4|AAP68906.2|  696|Caenorhabditis elegans Prion-like-(q...    29   6.3  
Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical pr...    28   8.3  
Z66494-12|CAE17686.1| 1007|Caenorhabditis elegans Hypothetical p...    28   8.3  
Z66494-11|CAA91265.2| 1048|Caenorhabditis elegans Hypothetical p...    28   8.3  
Z54284-8|CAE17775.1| 1007|Caenorhabditis elegans Hypothetical pr...    28   8.3  
Z54284-7|CAA91065.2| 1048|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>AC024859-18|AAK29974.1|  121|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.5 protein.
          Length = 121

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
 Frame = +2

Query: 158 LKTAPFDPRXPXT-KIRRGTATKVTWTSTVCQKVRGEKYEPCYYFKRVYRSLCPNEWVDK 334
           L  AP+D R P   K R+  A  V +    C ++ G+ Y+PC +F+ VY+  CP  W ++
Sbjct: 48  LWAAPYDARFPQVRKQRQCFAYYVDFHR--CNELMGQDYKPCKFFQNVYKDFCPGFWTER 105

Query: 335 WDNQRAEGTFAGR 373
           WD   +EG F  +
Sbjct: 106 WDELLSEGRFPAK 118


>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
           protein ZK617.1b protein.
          Length = 7158

 Score = 32.7 bits (71), Expect = 0.38
 Identities = 21/61 (34%), Positives = 29/61 (47%)
 Frame = +3

Query: 183 GFP*PKSDEALLPKLRGLPPFARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAP 362
           G P P  DE    KLR   P  RK  ++ ++  T SR+ +      SG+T  + SA  A 
Sbjct: 304 GLPPPGGDEK---KLRAGSPSTRKSPSRKSASPTPSRKGSSAGGAASGTTGASASATSAT 360

Query: 363 S 365
           S
Sbjct: 361 S 361


>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
           protein ZK617.1a protein.
          Length = 6839

 Score = 32.7 bits (71), Expect = 0.38
 Identities = 21/61 (34%), Positives = 29/61 (47%)
 Frame = +3

Query: 183 GFP*PKSDEALLPKLRGLPPFARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAP 362
           G P P  DE    KLR   P  RK  ++ ++  T SR+ +      SG+T  + SA  A 
Sbjct: 304 GLPPPGGDEK---KLRAGSPSTRKSPSRKSASPTPSRKGSSAGGAASGTTGASASATSAT 360

Query: 363 S 365
           S
Sbjct: 361 S 361


>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
           protein ZK617.1b protein.
          Length = 7158

 Score = 32.7 bits (71), Expect = 0.38
 Identities = 21/61 (34%), Positives = 29/61 (47%)
 Frame = +3

Query: 183 GFP*PKSDEALLPKLRGLPPFARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAP 362
           G P P  DE    KLR   P  RK  ++ ++  T SR+ +      SG+T  + SA  A 
Sbjct: 304 GLPPPGGDEK---KLRAGSPSTRKSPSRKSASPTPSRKGSSAGGAASGTTGASASATSAT 360

Query: 363 S 365
           S
Sbjct: 361 S 361


>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical
           protein ZK617.1a protein.
          Length = 6839

 Score = 32.7 bits (71), Expect = 0.38
 Identities = 21/61 (34%), Positives = 29/61 (47%)
 Frame = +3

Query: 183 GFP*PKSDEALLPKLRGLPPFARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAP 362
           G P P  DE    KLR   P  RK  ++ ++  T SR+ +      SG+T  + SA  A 
Sbjct: 304 GLPPPGGDEK---KLRAGSPSTRKSPSRKSASPTPSRKGSSAGGAASGTTGASASATSAT 360

Query: 363 S 365
           S
Sbjct: 361 S 361


>AC024777-4|AAF60561.3|  627|Caenorhabditis elegans Hypothetical
           protein Y42H9AR.4 protein.
          Length = 627

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 15/51 (29%), Positives = 29/51 (56%)
 Frame = +3

Query: 228 RGLPPFARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPSPVGFR 380
           R  PP +R+ +   + +   S++ +  +  +S +T+GT SAP+  S  G+R
Sbjct: 222 RAPPPASRRKSLNTSLNGKNSKKVSISNEVISPTTNGTRSAPRKASLAGYR 272


>Z78418-3|CAB01697.1|  932|Caenorhabditis elegans Hypothetical
           protein F25D7.4 protein.
          Length = 932

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 20/62 (32%), Positives = 30/62 (48%)
 Frame = +3

Query: 195 PKSDEALLPKLRGLPPFARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPSPVG 374
           P+   A  PK     P A+K  A     A  S+  + +SAP + + + T+SAP A +P  
Sbjct: 381 PRGAPAKAPKAE---PIAQKKVAGKVQRAAPSKPASAVSAPKATAPASTSSAP-ATAPEA 436

Query: 375 FR 380
            R
Sbjct: 437 SR 438


>AF039718-5|AAP68905.1|  760|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
           isoform a protein.
          Length = 760

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/54 (24%), Positives = 22/54 (40%)
 Frame = +3

Query: 240 PFARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPSPVGFRS*TFPML 401
           P  +K   +   H+ + ++   +          ++ AP APSP  F    FP L
Sbjct: 691 PLPQKPKIETNHHSAVEKDAEKIKVRSPPVVVASSPAPAAPSPFSFEETAFPSL 744


>AF039718-4|AAP68906.2|  696|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
           isoform b protein.
          Length = 696

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/54 (24%), Positives = 22/54 (40%)
 Frame = +3

Query: 240 PFARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPSPVGFRS*TFPML 401
           P  +K   +   H+ + ++   +          ++ AP APSP  F    FP L
Sbjct: 593 PLPQKPKIETNHHSAVEKDAEKIKVRSPPVVVASSPAPAAPSPFSFEETAFPSL 646


>Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical
           protein T24B8.4 protein.
          Length = 866

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +2

Query: 143 KSPADLKTAPFDPRXPXTKIRRGTATKVTWTSTVCQKVRGEKYEPCY 283
           K+P   +T P   + P   I    + KVT +S + +    EK  PC+
Sbjct: 594 KTPTREETTPVREKTPVKTIEEPKSKKVTASSALNKNKEKEKSPPCF 640


>Z66494-12|CAE17686.1| 1007|Caenorhabditis elegans Hypothetical
           protein D2085.5b protein.
          Length = 1007

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = -2

Query: 461 HILFY*ITSFDLIKTNRNKLKHRERLGSKSYRRRCLRRAGCPTCRPTHWG 312
           H LF    + D++    +KL+    +     RR CLR      C PT +G
Sbjct: 136 HFLF----ALDIVMIESSKLRLHPSISEVEVRRACLRALSSVICWPTTFG 181


>Z66494-11|CAA91265.2| 1048|Caenorhabditis elegans Hypothetical
           protein D2085.5a protein.
          Length = 1048

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = -2

Query: 461 HILFY*ITSFDLIKTNRNKLKHRERLGSKSYRRRCLRRAGCPTCRPTHWG 312
           H LF    + D++    +KL+    +     RR CLR      C PT +G
Sbjct: 177 HFLF----ALDIVMIESSKLRLHPSISEVEVRRACLRALSSVICWPTTFG 222


>Z54284-8|CAE17775.1| 1007|Caenorhabditis elegans Hypothetical
           protein D2085.5b protein.
          Length = 1007

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = -2

Query: 461 HILFY*ITSFDLIKTNRNKLKHRERLGSKSYRRRCLRRAGCPTCRPTHWG 312
           H LF    + D++    +KL+    +     RR CLR      C PT +G
Sbjct: 136 HFLF----ALDIVMIESSKLRLHPSISEVEVRRACLRALSSVICWPTTFG 181


>Z54284-7|CAA91065.2| 1048|Caenorhabditis elegans Hypothetical
           protein D2085.5a protein.
          Length = 1048

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = -2

Query: 461 HILFY*ITSFDLIKTNRNKLKHRERLGSKSYRRRCLRRAGCPTCRPTHWG 312
           H LF    + D++    +KL+    +     RR CLR      C PT +G
Sbjct: 177 HFLF----ALDIVMIESSKLRLHPSISEVEVRRACLRALSSVICWPTTFG 222


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,829,060
Number of Sequences: 27780
Number of extensions: 340852
Number of successful extensions: 919
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)