Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_I21
         (858 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0623 + 4672581-4673413,4674274-4674389,4674694-4674902,467...    34   0.17 
03_05_1116 + 30522573-30523112,30523201-30523353,30524053-30524325     31   1.6  
10_01_0079 - 1027655-1027863,1028416-1028619,1028858-1029485           28   8.3  

>01_01_0623 +
           4672581-4673413,4674274-4674389,4674694-4674902,
           4675953-4676072,4676185-4676313,4676394-4676442,
           4676899-4676970,4677574-4677707,4677798-4677915,
           4678332-4678541,4678630-4678942,4679539-4679632,
           4679854-4679962,4680243-4680514,4680597-4680724,
           4680832-4681066,4681570-4681758,4681845-4682128,
           4682218-4682398,4682486-4682728,4682904-4682986,
           4683119-4683227,4687996-4688091,4688675-4688764,
           4688881-4689129,4689233-4689412,4690179-4690250,
           4691385-4691474,4691605-4691705,4691794-4691959
          Length = 1757

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
 Frame = +2

Query: 215 NCGD---PFKSAKPPVECNTQDSINFNTLYLRNILPVEVLNSVTGAPRYCHKI----VMK 373
           NC D   P +   PP +CN   S++F TL +  +  +++   V G   + ++     V  
Sbjct: 526 NCDDDICPVEIIHPPEDCNLNSSLSF-TLQVCRVEDIDIWGLVQGTVIHFNRARSVSVHT 584

Query: 374 SGTVVRTCLGCQ 409
           SGT+  T LGC+
Sbjct: 585 SGTISATGLGCR 596


>03_05_1116 + 30522573-30523112,30523201-30523353,30524053-30524325
          Length = 321

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = +3

Query: 117 WQKV*HSPSLFYWRCSKQVIASSATNVTV--NRIRTAGTRSRA 239
           WQ   +   +FYWRC+  V  S+A  VTV  + +RT+G   RA
Sbjct: 176 WQFEQNDQRVFYWRCA--VYKSAAEEVTVWGSPLRTSGLLPRA 216


>10_01_0079 - 1027655-1027863,1028416-1028619,1028858-1029485
          Length = 346

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 378 ELLSVLAWDVNPQRXPAHLXSCRARLQ 458
           E  +  AW  NP    A L SC+A+LQ
Sbjct: 140 EAAATAAWHPNPTAQAAFLTSCKAKLQ 166


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,260,451
Number of Sequences: 37544
Number of extensions: 328499
Number of successful extensions: 697
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)