Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_I20
(980 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC015804-1|AAH15804.1| 481|Homo sapiens SF3A2 protein protein. 36 0.30
X72727-1|CAA51267.1| 464|Homo sapiens transformation upregulate... 31 6.4
S74678-1|AAB20770.1| 463|Homo sapiens heterogeneous nuclear rib... 31 6.4
CR456771-1|CAG33052.1| 464|Homo sapiens HNRPK protein. 31 6.4
BC014980-1|AAH14980.1| 463|Homo sapiens heterogeneous nuclear r... 31 6.4
BC000355-1|AAH00355.1| 464|Homo sapiens heterogeneous nuclear r... 31 6.4
AY911506-1|AAW84289.1| 464|Homo sapiens heterogeneous nuclear r... 31 6.4
AL354733-12|CAI16022.1| 379|Homo sapiens heterogeneous nuclear ... 31 6.4
AL354733-11|CAI16021.1| 464|Homo sapiens heterogeneous nuclear ... 31 6.4
AL354733-10|CAI16020.1| 463|Homo sapiens heterogeneous nuclear ... 31 6.4
AL354733-9|CAI16019.1| 428|Homo sapiens heterogeneous nuclear r... 31 6.4
AL354733-8|CAI16018.1| 306|Homo sapiens heterogeneous nuclear r... 31 6.4
AB209562-1|BAD92799.1| 442|Homo sapiens heterogeneous nuclear r... 31 6.4
>BC015804-1|AAH15804.1| 481|Homo sapiens SF3A2 protein protein.
Length = 481
Score = 35.5 bits (78), Expect = 0.30
Identities = 16/30 (53%), Positives = 16/30 (53%)
Frame = +1
Query: 67 PXXXPPXPXXXXXXPPPPXXXKKKKKKKKK 156
P PP P PPP KKKKKKKKK
Sbjct: 443 PMLRPPLPSEGPGNIPPPPPKKKKKKKKKK 472
Score = 30.7 bits (66), Expect = 8.5
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -2
Query: 409 NXPPPPPXXRKXKKKIKK 356
N PPPPP +K KKK KK
Sbjct: 456 NIPPPPPKKKKKKKKKKK 473
>X72727-1|CAA51267.1| 464|Homo sapiens transformation upregulated
nuclear protein protein.
Length = 464
Score = 31.1 bits (67), Expect = 6.4
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -2
Query: 469 KKXPXXPPPGGGXXFXXKKKNXP-PPPPXXR 380
++ P PPPG G + +N P PPPP R
Sbjct: 286 RRGPPPPPPGRGGRGGSRARNLPLPPPPPPR 316
>S74678-1|AAB20770.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein complex K protein.
Length = 463
Score = 31.1 bits (67), Expect = 6.4
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -2
Query: 469 KKXPXXPPPGGGXXFXXKKKNXP-PPPPXXR 380
++ P PPPG G + +N P PPPP R
Sbjct: 286 RRGPPPPPPGRGGRGGSRARNLPLPPPPPPR 316
>CR456771-1|CAG33052.1| 464|Homo sapiens HNRPK protein.
Length = 464
Score = 31.1 bits (67), Expect = 6.4
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -2
Query: 469 KKXPXXPPPGGGXXFXXKKKNXP-PPPPXXR 380
++ P PPPG G + +N P PPPP R
Sbjct: 286 RRGPPPPPPGRGGRGGSRARNLPLPPPPPPR 316
>BC014980-1|AAH14980.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 463
Score = 31.1 bits (67), Expect = 6.4
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -2
Query: 469 KKXPXXPPPGGGXXFXXKKKNXP-PPPPXXR 380
++ P PPPG G + +N P PPPP R
Sbjct: 286 RRGPPPPPPGRGGRGGSRARNLPLPPPPPPR 316
>BC000355-1|AAH00355.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 464
Score = 31.1 bits (67), Expect = 6.4
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -2
Query: 469 KKXPXXPPPGGGXXFXXKKKNXP-PPPPXXR 380
++ P PPPG G + +N P PPPP R
Sbjct: 286 RRGPPPPPPGRGGRGGSRARNLPLPPPPPPR 316
>AY911506-1|AAW84289.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K transcript variant protein.
Length = 464
Score = 31.1 bits (67), Expect = 6.4
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -2
Query: 469 KKXPXXPPPGGGXXFXXKKKNXP-PPPPXXR 380
++ P PPPG G + +N P PPPP R
Sbjct: 286 RRGPPPPPPGRGGRGGSRARNLPLPPPPPPR 316
>AL354733-12|CAI16022.1| 379|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 379
Score = 31.1 bits (67), Expect = 6.4
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -2
Query: 469 KKXPXXPPPGGGXXFXXKKKNXP-PPPPXXR 380
++ P PPPG G + +N P PPPP R
Sbjct: 262 RRGPPPPPPGRGGRGGSRARNLPLPPPPPPR 292
>AL354733-11|CAI16021.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 464
Score = 31.1 bits (67), Expect = 6.4
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -2
Query: 469 KKXPXXPPPGGGXXFXXKKKNXP-PPPPXXR 380
++ P PPPG G + +N P PPPP R
Sbjct: 286 RRGPPPPPPGRGGRGGSRARNLPLPPPPPPR 316
>AL354733-10|CAI16020.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 463
Score = 31.1 bits (67), Expect = 6.4
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -2
Query: 469 KKXPXXPPPGGGXXFXXKKKNXP-PPPPXXR 380
++ P PPPG G + +N P PPPP R
Sbjct: 286 RRGPPPPPPGRGGRGGSRARNLPLPPPPPPR 316
>AL354733-9|CAI16019.1| 428|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 428
Score = 31.1 bits (67), Expect = 6.4
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -2
Query: 469 KKXPXXPPPGGGXXFXXKKKNXP-PPPPXXR 380
++ P PPPG G + +N P PPPP R
Sbjct: 251 RRGPPPPPPGRGGRGGSRARNLPLPPPPPPR 281
>AL354733-8|CAI16018.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 306
Score = 31.1 bits (67), Expect = 6.4
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -2
Query: 469 KKXPXXPPPGGGXXFXXKKKNXP-PPPPXXR 380
++ P PPPG G + +N P PPPP R
Sbjct: 217 RRGPPPPPPGRGGRGGSRARNLPLPPPPPPR 247
>AB209562-1|BAD92799.1| 442|Homo sapiens heterogeneous nuclear
ribonucleoprotein K isoform a variant protein.
Length = 442
Score = 31.1 bits (67), Expect = 6.4
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -2
Query: 469 KKXPXXPPPGGGXXFXXKKKNXP-PPPPXXR 380
++ P PPPG G + +N P PPPP R
Sbjct: 264 RRGPPPPPPGRGGRGGSRARNLPLPPPPPPR 294
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,963,705
Number of Sequences: 237096
Number of extensions: 1770467
Number of successful extensions: 8564
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7167
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 13102819592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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