Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_I09
         (927 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58751-7|AAB00658.2|  729|Caenorhabditis elegans Hepatocyte grow...    69   6e-12
U97407-8|AAN84851.1|  397|Caenorhabditis elegans Prion-like-(q/n...    58   9e-09
U97407-7|AAB52480.2|  457|Caenorhabditis elegans Prion-like-(q/n...    58   9e-09
U41542-4|AAK39154.1|  437|Caenorhabditis elegans Hypothetical pr...    56   3e-08
U41542-3|AAK39156.1|  403|Caenorhabditis elegans Hypothetical pr...    56   3e-08
AF003385-3|AAB54248.2|  228|Caenorhabditis elegans Hypothetical ...    31   0.88 
Z81453-6|CAH04639.1|  283|Caenorhabditis elegans Hypothetical pr...    28   8.2  

>U58751-7|AAB00658.2|  729|Caenorhabditis elegans Hepatocyte growth
           factor-regulatedtk substrate (hrs) family protein 1
           protein.
          Length = 729

 Score = 68.5 bits (160), Expect = 6e-12
 Identities = 31/89 (34%), Positives = 49/89 (55%)
 Frame = +3

Query: 405 SSPFDQDVERATSENNTSEEWGLIMEICDRAGASSTSAKECLRAVMRRLAHPDPHVQVHA 584
           ++ F + +++AT        W  I+   D   +    AK  L+A+ +R+ H +PHV  H 
Sbjct: 2   ATKFQRVLDQATDSTLVEPNWEGIILCTDMIRSGEVPAKPSLQAIRKRMQHENPHVVNHT 61

Query: 585 ATLLDACVANCGRFFHLEVASRDFEXEFR 671
             +LDACV NCG   H EVA+R+F  +F+
Sbjct: 62  LLVLDACVKNCGHKVHAEVATREFMEDFK 90


>U97407-8|AAN84851.1|  397|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 19,
           isoform b protein.
          Length = 397

 Score = 58.0 bits (134), Expect = 9e-09
 Identities = 29/89 (32%), Positives = 48/89 (53%)
 Frame = +3

Query: 408 SPFDQDVERATSENNTSEEWGLIMEICDRAGASSTSAKECLRAVMRRLAHPDPHVQVHAA 587
           S ++  + + T+   T E W  I+  CD        +K  ++++ +RL + DPHV + A 
Sbjct: 2   SAYEDLLGKITAPTITVENWEGILAFCDMINNDFEGSKTGIKSLRKRLNNRDPHVVLLAI 61

Query: 588 TLLDACVANCGRFFHLEVASRDFEXEFRA 674
           ++LD+C ANC   F  EV+S  F  E +A
Sbjct: 62  SVLDSCWANCEERFRKEVSSAQFINELKA 90


>U97407-7|AAB52480.2|  457|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 19,
           isoform a protein.
          Length = 457

 Score = 58.0 bits (134), Expect = 9e-09
 Identities = 29/89 (32%), Positives = 48/89 (53%)
 Frame = +3

Query: 408 SPFDQDVERATSENNTSEEWGLIMEICDRAGASSTSAKECLRAVMRRLAHPDPHVQVHAA 587
           S ++  + + T+   T E W  I+  CD        +K  ++++ +RL + DPHV + A 
Sbjct: 10  SAYEDLLGKITAPTITVENWEGILAFCDMINNDFEGSKTGIKSLRKRLNNRDPHVVLLAI 69

Query: 588 TLLDACVANCGRFFHLEVASRDFEXEFRA 674
           ++LD+C ANC   F  EV+S  F  E +A
Sbjct: 70  SVLDSCWANCEERFRKEVSSAQFINELKA 98


>U41542-4|AAK39154.1|  437|Caenorhabditis elegans Hypothetical
           protein C07A12.7a protein.
          Length = 437

 Score = 56.4 bits (130), Expect = 3e-08
 Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
 Frame = +3

Query: 405 SSPFDQDVERATSENN-TSEEWGLIMEICDRAGASSTSAKECLRAVMRRLAH---PDPHV 572
           ++P  + +E AT  N   +E WGL MEICD    +    ++ +RA+ +RL +    +  V
Sbjct: 36  ATPVGRKIELATDANLLATENWGLNMEICDFINGTEDGPRDAVRALKKRLHNAMSKNNAV 95

Query: 573 QVHAATLLDACVANCGRFFHLEVASRDF 656
            ++  T+L+  V NC   FH+ V ++DF
Sbjct: 96  VMYTLTVLETAVKNCNHHFHVLVCNKDF 123


>U41542-3|AAK39156.1|  403|Caenorhabditis elegans Hypothetical
           protein C07A12.7b protein.
          Length = 403

 Score = 56.4 bits (130), Expect = 3e-08
 Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
 Frame = +3

Query: 405 SSPFDQDVERATSENN-TSEEWGLIMEICDRAGASSTSAKECLRAVMRRLAH---PDPHV 572
           ++P  + +E AT  N   +E WGL MEICD    +    ++ +RA+ +RL +    +  V
Sbjct: 36  ATPVGRKIELATDANLLATENWGLNMEICDFINGTEDGPRDAVRALKKRLHNAMSKNNAV 95

Query: 573 QVHAATLLDACVANCGRFFHLEVASRDF 656
            ++  T+L+  V NC   FH+ V ++DF
Sbjct: 96  VMYTLTVLETAVKNCNHHFHVLVCNKDF 123


>AF003385-3|AAB54248.2|  228|Caenorhabditis elegans Hypothetical
           protein R08F11.6 protein.
          Length = 228

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 21/52 (40%), Positives = 29/52 (55%)
 Frame = +1

Query: 253 LFLKFFIKQEIFV*SILFHSDFSIKNYLIFLSITYNQVDVFLLTKWGYLALP 408
           L  KF + Q + V  I  +S  S+ + LIFLS+TYNQ       + GY +LP
Sbjct: 90  LLTKFGMHQTLIVFGI--YSMLSLFSKLIFLSLTYNQNVSLQNRQEGYCSLP 139


>Z81453-6|CAH04639.1|  283|Caenorhabditis elegans Hypothetical
           protein B0250.10 protein.
          Length = 283

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 244 ITLFLTKVISYTKVFIIYRIFTVRISILWR 155
           I +F T ++    VFI Y  F + ISI WR
Sbjct: 4   IAVFTTLILILFSVFICYLNFLLLISIFWR 33


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,756,684
Number of Sequences: 27780
Number of extensions: 337869
Number of successful extensions: 765
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)