Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_I04
(891 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.090
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.090
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.090
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 31 1.5
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 31 1.5
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 31 1.5
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 31 1.5
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 5.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 5.9
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 28 7.8
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 28 7.8
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 28 7.8
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 28 7.8
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 28 7.8
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 28 7.8
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.7 bits (76), Expect = 0.090
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +1
Query: 466 PXXPPPPRGXKXXPPPPGXGXFFXPXXXAPPXEKXSP 576
P PPPP G PPPP G F PP +P
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +1
Query: 466 PXXPPPPRGXKXXPPPPGXGXFFXPXXXAPP 558
P PPPP G K PPPP F P P
Sbjct: 771 PPPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 801
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.7 bits (76), Expect = 0.090
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +1
Query: 466 PXXPPPPRGXKXXPPPPGXGXFFXPXXXAPPXEKXSP 576
P PPPP G PPPP G F PP +P
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +1
Query: 466 PXXPPPPRGXKXXPPPPGXGXFFXPXXXAPP 558
P PPPP G K PPPP F P P
Sbjct: 771 PPPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 801
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.7 bits (76), Expect = 0.090
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +1
Query: 466 PXXPPPPRGXKXXPPPPGXGXFFXPXXXAPPXEKXSP 576
P PPPP G PPPP G F PP +P
Sbjct: 342 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 378
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +1
Query: 466 PXXPPPPRGXKXXPPPPGXGXFFXPXXXAPP 558
P PPPP G K PPPP F P P
Sbjct: 354 PPPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 384
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 475 PPPPRGXKXXPPPPGXGXFFXPXXXAPPXEKXSP 576
PPPP+G + PP G + P PP ++ P
Sbjct: 681 PPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPP 714
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 475 PPPPRGXKXXPPPPGXGXFFXPXXXAPPXEKXSP 576
PPPP+G + PP G + P PP ++ P
Sbjct: 681 PPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPP 714
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 475 PPPPRGXKXXPPPPGXGXFFXPXXXAPP 558
PPPPRG PPP G P PP
Sbjct: 297 PPPPRGHFPPPPPHFMGRGMPPPFMPPP 324
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 475 PPPPRGXKXXPPPPGXGXFFXPXXXAPP 558
PPPPRG PPP G P PP
Sbjct: 297 PPPPRGHFPPPPPHFMGRGMPPPFMPPP 324
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 475 PPPPRGXKXXPPPPGXGXFFXPXXXAPPXE 564
PPPPR PPPP G P PP +
Sbjct: 289 PPPPRAGSPPPPPPPRGS--PPTGSLPPPQ 316
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 475 PPPPRGXKXXPPPPGXGXFFXPXXXAPP 558
PPPP G PPPP G P +PP
Sbjct: 273 PPPPTGSP--PPPPAGGSPPPPRAGSPP 298
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 475 PPPPRGXKXXPPPPGXGXFFXPXXXAPPXE 564
PPPPR PPPP G P PP +
Sbjct: 310 PPPPRAGSPPPPPPPRGS--PPTGSLPPPQ 337
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 475 PPPPRGXKXXPPPPGXGXFFXPXXXAPP 558
PPPP G PPPP G P +PP
Sbjct: 294 PPPPTGSP--PPPPAGGSPPPPRAGSPP 319
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 475 PPPPRGXKXXPPPPGXGXFFXPXXXAPPXE 564
PPPPR PPPP G P PP +
Sbjct: 295 PPPPRAGSPPPPPPPRGS--PPTGSLPPPQ 322
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 475 PPPPRGXKXXPPPPGXGXFFXPXXXAPP 558
PPPP G PPPP G P +PP
Sbjct: 279 PPPPTGSP--PPPPAGGSPPPPRAGSPP 304
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +1
Query: 466 PXXPPPPRGXKXXPPPPGXGXFFXPXXXAPPXEKXSP 576
P PP P G PPPP + P PP P
Sbjct: 275 PPMPPTP-GMTPRPPPPPSSGMWPPPPPPPPGRTPGP 310
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +1
Query: 466 PXXPPPPRGXKXXPPPPGXGXFFXPXXXAPPXEKXSP 576
P PP P G PPPP + P PP P
Sbjct: 285 PPMPPTP-GMTPRPPPPPSSGMWPPPPPPPPGRTPGP 320
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 475 PPPPRGXKXXPPPPG 519
P PPRG PPPPG
Sbjct: 780 PMPPRGGPGAPPPPG 794
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 475 PPPPRGXKXXPPPPG 519
P PPRG PPPPG
Sbjct: 780 PMPPRGGPGAPPPPG 794
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 475 PPPPRGXKXXPPPPG 519
PPPP G PPPPG
Sbjct: 791 PPPPLGIIPPPPPPG 805
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 475 PPPPRGXKXXPPPPG 519
P PPRG PPPPG
Sbjct: 780 PMPPRGGPGAPPPPG 794
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 475 PPPPRGXKXXPPPPG 519
P PPRG PPPPG
Sbjct: 780 PMPPRGGPGAPPPPG 794
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 466 PXXPPPPRGXKXXPPPPGXG 525
P PPPP K PPPP G
Sbjct: 86 PPPPPPPPTLKAPPPPPILG 105
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 475 PPPPRGXKXXPPPPG 519
PPPP G PPPPG
Sbjct: 791 PPPPLGIIPPPPPPG 805
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,619,868
Number of Sequences: 27780
Number of extensions: 149667
Number of successful extensions: 1033
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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