Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_H16
(892 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0706 - 6235817-6235988,6236028-6236338,6236421-6236627,623... 34 0.13
07_03_0446 - 18285132-18285221,18285437-18285499,18285805-182858... 33 0.23
10_07_0039 - 12269928-12270103,12270871-12271015,12271066-122710... 33 0.30
08_02_0888 - 22284554-22285144 33 0.40
03_05_1074 + 30168065-30168577 32 0.70
11_08_0048 - 28022335-28022520,28022607-28022699,28022804-280228... 31 1.6
11_06_0168 + 20868696-20870072 30 2.1
04_04_1375 + 33040329-33040854,33041611-33041838,33041984-330420... 30 2.1
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 30 2.1
08_02_1583 + 28036125-28037030,28037411-28037656 30 2.8
07_03_0288 + 16285485-16285721,16285811-16286184,16286499-162868... 30 2.8
08_01_0662 + 5714108-5714147,5714336-5715669,5716482-5716673,571... 29 3.8
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298... 29 3.8
09_03_0040 + 11816056-11819069,11819837-11820428 29 5.0
05_03_0134 + 8790409-8790421,8790716-8791023,8791836-8792153,879... 29 5.0
05_03_0014 - 7372231-7372984,7373065-7373120,7375012-7375335 29 5.0
04_04_0265 + 24040689-24041051,24041210-24041457,24041845-240423... 29 5.0
02_02_0403 - 9866122-9867231 29 5.0
12_02_0247 + 16409988-16411367 29 6.6
09_06_0081 + 20745627-20748144,20748211-20748308 29 6.6
08_02_1374 + 26519720-26519989,26520679-26520737,26520810-265209... 29 6.6
04_04_0368 + 24741755-24741970,24742415-24742811,24742892-247431... 29 6.6
03_01_0381 - 2960533-2960805 29 6.6
01_03_0303 + 14792842-14792949,14793659-14793760,14794657-147948... 29 6.6
12_01_0790 + 7216452-7216489,7216664-7216722,7217268-7218750,721... 28 8.7
10_08_0736 + 20205934-20206551,20207258-20207426,20207562-202076... 28 8.7
08_02_0409 + 16837792-16837896,16839256-16839328,16839376-168397... 28 8.7
04_04_0977 + 29851086-29851463,29852054-29852551,29853665-298537... 28 8.7
02_01_0409 - 2978104-2978642,2979106-2979931,2980112-2982178 28 8.7
02_01_0384 - 2781362-2782299,2782320-2782428 28 8.7
02_01_0361 - 2600398-2602780,2602815-2603479,2603553-2603981 28 8.7
02_01_0353 + 2545982-2549833 28 8.7
01_01_0420 + 3175544-3176696,3177035-3178581,3179623-3179688,317... 28 8.7
>08_01_0706 -
6235817-6235988,6236028-6236338,6236421-6236627,
6236718-6236889,6236994-6237249,6238015-6238073,
6238693-6238782,6238869-6239013,6239598-6239712,
6240690-6240701
Length = 512
Score = 34.3 bits (75), Expect = 0.13
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Frame = +3
Query: 336 NTGTSDPRFLVGGNGKVYEGSGWLHVGAHTYGYNSRSIGVAFIGNFNTDEPS----GAML 503
NTG S +GG G+++ G W + Y S S +A G + ++PS + L
Sbjct: 385 NTGYSFVNCSIGGTGRIWLGRAWRPYSTVVFAYTSMSDIIASEGWNDWNDPSRDQYASSL 444
Query: 504 EALRSLLRCGVERGHLAGDYRVVAHRQLIASESPGRKLYNQIRRWP 641
++ S++ C +R G+YR ++ P + + ++ P
Sbjct: 445 YSV-SIVTCMTKRTVFYGEYRCTGDGANLSDRVPYAQKLSDVQVLP 489
>07_03_0446 -
18285132-18285221,18285437-18285499,18285805-18285867,
18286079-18286129,18286413-18286506,18286696-18286856,
18287089-18287145,18287380-18287493,18287934-18287999,
18288063-18288266,18289207-18289284,18289669-18289788,
18290425-18290491,18290635-18290735,18290820-18290936,
18292024-18292107,18292181-18292309,18292385-18292510,
18292622-18292696,18292814-18292947,18293032-18293137,
18293220-18293276,18294387-18294573,18295244-18295407,
18296129-18296353,18296538-18296744,18297043-18297375,
18297604-18297993
Length = 1220
Score = 33.5 bits (73), Expect = 0.23
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -3
Query: 323 CGWSGYSAPAPRSQRPSCR 267
CG+ GYS PAP++ RPSCR
Sbjct: 63 CGY-GYSTPAPKAPRPSCR 80
>10_07_0039 -
12269928-12270103,12270871-12271015,12271066-12271094,
12271394-12271478
Length = 144
Score = 33.1 bits (72), Expect = 0.30
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 196 DPGARVVPGAAREPRHRPAHSHTL 267
D G R VPG + PRHRP H T+
Sbjct: 81 DGGRRAVPGQSTVPRHRPRHDPTI 104
>08_02_0888 - 22284554-22285144
Length = 196
Score = 32.7 bits (71), Expect = 0.40
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 415 PTCSQPEPSYTLPLPPTRKRGSDVPVLQGLH 323
P QPEPS P P +G+DVPV+ H
Sbjct: 29 PMPDQPEPSQPEPSQPEESKGADVPVMVRTH 59
>03_05_1074 + 30168065-30168577
Length = 170
Score = 31.9 bits (69), Expect = 0.70
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = -3
Query: 539 LHAAAQQRPQRLQHRAARLVRVEVADECDSDGPRVVPVGVRADVQPAGA 393
L AA ++RP + + AA VR A D DGP V P + P A
Sbjct: 95 LPAAMRRRPLQAEEMAALAVRASAALVGDHDGPLVFPEAAASAADPRAA 143
>11_08_0048 -
28022335-28022520,28022607-28022699,28022804-28022882,
28022951-28023061,28023133-28023390,28023468-28023970,
28024094-28024729,28024778-28025116
Length = 734
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 403 QPEPSYTLPLPPTRKRGSDVPVLQGLH 323
QPEPS P P +G+DVPV+ H
Sbjct: 330 QPEPSQLEPSQPEELKGADVPVMVRTH 356
>11_06_0168 + 20868696-20870072
Length = 458
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -1
Query: 424 VCAPTCSQPEPSYTLPLPPTRKRGSDVP--VLQGLHVVGLDIPHQLLAASV 278
+C P CS E T+ T + SD+P +L + + L+IP L AASV
Sbjct: 29 LCLPPCSTKEELRTILTETTAREFSDLPHDILMDI-IAMLEIPDALRAASV 78
>04_04_1375 +
33040329-33040854,33041611-33041838,33041984-33042081,
33042406-33042450,33042678-33042846,33042917-33043026,
33043983-33044051,33044085-33044158,33044738-33044804,
33044876-33044988,33045148-33045237,33046030-33046144,
33046230-33046388
Length = 620
Score = 30.3 bits (65), Expect = 2.1
Identities = 24/86 (27%), Positives = 36/86 (41%)
Frame = -1
Query: 559 SPARWPRSTPQRSSDRSASSIAPLGSSVLKLPMNATPMDLELYP*VCAPTCSQPEPSYTL 380
+P R P ++DRSAS +A S + + + + P P PS+ L
Sbjct: 70 TPTPPKRRPPPVAADRSASVVADTPRSFVPCSLRNRAIAGD------TPDSVLPSPSFHL 123
Query: 379 PLPPTRKRGSDVPVLQGLHVVGLDIP 302
P + GSDVP GL + + P
Sbjct: 124 DAPDSATPGSDVPCSVGLDDIVPETP 149
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 30.3 bits (65), Expect = 2.1
Identities = 23/83 (27%), Positives = 36/83 (43%)
Frame = -2
Query: 300 TSSSQPASVLQKGVTVCWTMTRLTGRARYDTCTGIKPSHCFLLTTSQSAAISVRSELRAS 121
TS+S A++ + T RL + + +PS ++ +S S RS LRAS
Sbjct: 35 TSASASAAMQMQAATTTTAARRLAPKPQ-PQANRCRPSSVSVVAAGRSRRRSARSSLRAS 93
Query: 120 ASTTAEWRRAMSRSGACQHVSTR 52
AS E + S + +TR
Sbjct: 94 ASLDQEVKERASPAAGKSGQATR 116
>08_02_1583 + 28036125-28037030,28037411-28037656
Length = 383
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/53 (39%), Positives = 24/53 (45%)
Frame = -1
Query: 421 CAPTCSQPEPSYTLPLPPTRKRGSDVPVLQGLHVVGLDIPHQLLAASVRPAEG 263
C P C QPE TL +PP G VLQ V GL + H +V P G
Sbjct: 242 CYPECPQPE--LTLGMPPHSDYGFLTLVLQD-EVAGLQVMHAGEWLTVDPLPG 291
>07_03_0288 +
16285485-16285721,16285811-16286184,16286499-16286892,
16286917-16287806,16291189-16291446,16291518-16291628,
16291697-16291775,16291880-16291972,16292095-16292280
Length = 873
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 415 PTCSQPEPSYTLPLPPTRKRGSDVPVLQGLH 323
P QPE S + P P +G+DVPV+ H
Sbjct: 529 PMPDQPEQSQSEPSQPEEPKGADVPVMVRTH 559
>08_01_0662 +
5714108-5714147,5714336-5715669,5716482-5716673,
5716769-5716958,5717398-5717477
Length = 611
Score = 29.5 bits (63), Expect = 3.8
Identities = 21/63 (33%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Frame = +1
Query: 46 GMPRADVLARAAPRHGPPPLGSCTRARSQLASHRNSSRLRRRQ*KAMGRFDP--GARVVP 219
GM R AR PR P P G ASH RRR R+ P G + P
Sbjct: 19 GMSRRTTTARWVPRDRPEPAGRSGTGAPGRASHALGQMPRRRTTTTTARWVPRQGQKGEP 78
Query: 220 GAA 228
G +
Sbjct: 79 GGS 81
>01_01_0386 -
2985563-2985986,2986301-2986390,2986529-2986668,
2986798-2986893,2987003-2987042,2987760-2987887
Length = 305
Score = 29.5 bits (63), Expect = 3.8
Identities = 23/71 (32%), Positives = 28/71 (39%)
Frame = +1
Query: 46 GMPRADVLARAAPRHGPPPLGSCTRARSQLASHRNSSRLRRRQ*KAMGRFDPGARVVPGA 225
G PR R +PR P GS +S S R+S RR GR P A
Sbjct: 191 GSPRDSRSPRGSPRDSRSPKGSPRDTQSPRGSPRDSRSPRRSASPPNGR---NRSPTPNA 247
Query: 226 AREPRHRPAHS 258
+R P R + S
Sbjct: 248 SRSPAPRDSRS 258
>09_03_0040 + 11816056-11819069,11819837-11820428
Length = 1201
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = -1
Query: 526 RSSDRSASSIAPLGSSVLKLPMNATPMDL 440
R R+AS++A G+S+ +LP+ ATP+ +
Sbjct: 301 RDCGRAASTLAESGASMEELPLEATPISV 329
>05_03_0134 +
8790409-8790421,8790716-8791023,8791836-8792153,
8793021-8793212,8793383-8793618,8793696-8793953,
8794237-8794315,8797728-8797895
Length = 523
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = -1
Query: 544 PRSTPQRSSDRSASSIAPLGS--SVLKLPMNATPMDLELYP*VCAPTCSQPEPSYTLPLP 371
PRS + S+ + ++P + P ++E P P +QP+PS
Sbjct: 208 PRSRKWQQSELAIQEVSPTQQLETAQSEPKKQAEGEIEEVPEQAMP--NQPKPSQLEQSQ 265
Query: 370 PTRKRGSDVPVLQG 329
P +G++VPV+ G
Sbjct: 266 PEEPKGANVPVMNG 279
>05_03_0014 - 7372231-7372984,7373065-7373120,7375012-7375335
Length = 377
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -1
Query: 226 PRQVRHVHRDQTVPLLFTDDVAIGCYFCEKRAESERE 116
P+ VR V R +TVP+ +TD A G EK E E E
Sbjct: 120 PKFVR-VLRPKTVPIRYTDTFASGTVALEKELEKEFE 155
>04_04_0265 +
24040689-24041051,24041210-24041457,24041845-24042365,
24042433-24042968
Length = 555
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -2
Query: 153 AISVRSELRASASTTAEWRRAMSRSGACQHVSTRHAXIL 37
A+S+R+ELR +A+W + M R H + ++
Sbjct: 185 AMSLRNELRGPRQNSADWYKYMQRGAEAVHAANPRVVVI 223
>02_02_0403 - 9866122-9867231
Length = 369
Score = 29.1 bits (62), Expect = 5.0
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = +1
Query: 82 PRHGPPPLGSCTRARSQLASHRNSSRLRRRQ*KAMGR-FDPGARVVPGAAREPRHRPAHS 258
P+H PL R+ S + R RRRQ +AM R F G +V G R A +
Sbjct: 297 PQHPVVPLSDDDRSDSPELPPESVPRRRRRQWRAMPRDFSHGRALVHGGHNNQRRGGAGA 356
Query: 259 -HTLLQDGRWLR 291
H+ RW R
Sbjct: 357 VHSPSSRYRWSR 368
>12_02_0247 + 16409988-16411367
Length = 459
Score = 28.7 bits (61), Expect = 6.6
Identities = 32/97 (32%), Positives = 39/97 (40%), Gaps = 1/97 (1%)
Frame = +1
Query: 46 GMPRADVLARAAPRHGPPPLGSCTRARSQLASHRNSSRLRRRQ*KAMGRFDPGARVVPGA 225
G+P DV+ A R P L C A QL + LRR R A VP
Sbjct: 23 GLP-IDVIVEIAERSDPITLLRCAAACRQLRRAISGEGLRREL-----RLRNAAGFVPVL 76
Query: 226 AREPRHRPAH-SHTLLQDGRWLRGAGAEYPDQPHGGL 333
R ++P H +H LQ+ AGA D HG L
Sbjct: 77 LRGFYYQPLHGAHGFLQEPVRFFAAGAGAGDH-HGQL 112
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 28.7 bits (61), Expect = 6.6
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
Frame = -1
Query: 517 DRSASSIAPLGSSVLKLPMNATPMDLELYP*VCAPTCSQPEPSYTLPLPPTRKRGSDVPV 338
D ++SS A + L + A L + P + P P+ +P+PPT R P
Sbjct: 316 DGASSSFATPRMRTISLALRAPAPHLRAPRTLAPPAPTPPAPATPVPMPPTPTRLVPTPP 375
Query: 337 LQGLHVVGLDIPHQLLAA--SVRPAEGCD 257
G D+P + + + RP+ G D
Sbjct: 376 APG---PPADVPPRFTVSPTTTRPSFGYD 401
>08_02_1374 +
26519720-26519989,26520679-26520737,26520810-26520924,
26521092-26521136,26521424-26521477
Length = 180
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 14 PFHYRESLKXLACRVLTCWHAPLLDMARLH 103
P H E ++ + CWH LLD+A+ H
Sbjct: 3 PRHSNEGIRLDFAKTNKCWHHTLLDIAKPH 32
>04_04_0368 +
24741755-24741970,24742415-24742811,24742892-24743187,
24743860-24744096
Length = 381
Score = 28.7 bits (61), Expect = 6.6
Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Frame = +1
Query: 199 PGARVVPGAAREPRHRPAHSHTL-----LQDGRWLRGAGAEYPDQPHGGLAILGHRTLVS 363
P + P A P HR HSH + G G P++ HG LA++ L+
Sbjct: 178 PEGNLPPSDATLPMHRSMHSHAFNYTSGMASSSGGSGGGGFPPERKHGLLAMMAWGVLMP 237
Query: 364 WWEVTARCTR 393
+ AR R
Sbjct: 238 LGMMAARYFR 247
>03_01_0381 - 2960533-2960805
Length = 90
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -1
Query: 217 VRHVHRDQTVPLLFTDDVAIGCYFCEKRAESERE 116
+R R +TVP+ +TD A G EK E E E
Sbjct: 1 MRRSQRPKTVPIRYTDTFASGTIALEKELEKEFE 34
>01_03_0303 +
14792842-14792949,14793659-14793760,14794657-14794800,
14794906-14794986,14795078-14795147,14795267-14795337,
14795427-14795594,14796030-14796074,14796449-14796511,
14796594-14796869,14797858-14797971,14798099-14798225,
14798315-14798484,14798743-14798841,14799577-14799630,
14801487-14801522,14801741-14801844,14801952-14802186,
14802377-14802609,14802846-14803346,14803422-14803716,
14805796-14805881,14806952-14807064,14807303-14807385,
14808014-14808866,14809215-14809364,14809963-14811146
Length = 1854
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -2
Query: 351 PMSQYCKASMWLVWIFRTSSSQPASV-LQKGVTVCWTMTRLTGRAR 217
P+ +YC +W +WI ++ QP V Q+ + W+ GRA+
Sbjct: 816 PLVKYCPPELWRMWI--SNLLQPLFVHCQQALDFSWSSLLREGRAK 859
>12_01_0790 +
7216452-7216489,7216664-7216722,7217268-7218750,
7218828-7218892,7219023-7219080,7219152-7219262,
7219332-7219410,7219521-7219613,7219701-7219886
Length = 723
Score = 28.3 bits (60), Expect = 8.7
Identities = 21/74 (28%), Positives = 28/74 (37%)
Frame = -1
Query: 544 PRSTPQRSSDRSASSIAPLGSSVLKLPMNATPMDLELYP*VCAPTCSQPEPSYTLPLPPT 365
P P +S R+ SV P ++E P P QPE S P P
Sbjct: 319 PVPEPPVASPRTKKDAEEPSESVQAEPTKLAAGEIEAVP--DQPMPDQPEQSQPEPSQPE 376
Query: 364 RKRGSDVPVLQGLH 323
+G+DV V+ H
Sbjct: 377 EPKGADVLVMVRTH 390
>10_08_0736 +
20205934-20206551,20207258-20207426,20207562-20207692,
20208100-20208144,20208145-20208939,20209081-20209128,
20209504-20209620,20210087-20210161
Length = 665
Score = 28.3 bits (60), Expect = 8.7
Identities = 38/146 (26%), Positives = 56/146 (38%), Gaps = 5/146 (3%)
Frame = -3
Query: 689 VIMLRVLDGVHVLQPLRPASYLVVELPAGALRGNELSVRHDAVVPREVAALHAAAQQR-- 516
V+ L L+ + Q + + V P AL + AV+ +A L AAQ+R
Sbjct: 28 VVTLNCLEDPSMEQEVLAGAAAVEHAPLSALSSGRVEAAA-AVLLTSLAFLPRAAQRRLR 86
Query: 515 PQRLQHRAARLVRVEVADECDSDGPRVVPVGVRADVQPAGALVHLAVTSHQETRV---RC 345
P +L R A G R+V V + A ++ L + + T +
Sbjct: 87 PWQLILCLGSPDRAADAAVAAELGLRLVHVDANRAEEVADTVMALFLGLLRRTHLLSRHA 146
Query: 344 PSIARPPCGWSGYSAPAPRSQRPSCR 267
S + PP GW G P R R CR
Sbjct: 147 SSYSAPPAGWLGSVQPLCRGMR-RCR 171
>08_02_0409 +
16837792-16837896,16839256-16839328,16839376-16839730,
16839995-16840106
Length = 214
Score = 28.3 bits (60), Expect = 8.7
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = -1
Query: 490 LGSSVLKLPMNATPMDLELYP*VCAPTCSQPEPSYTLPLPPTRKRGSDVPVLQGLHVVGL 311
LG +LP+ L L+P V P+ + +LP PP K+ + V Q ++
Sbjct: 72 LGPPCYQLPLAKVNSSLPLWPPVTCPSTFAQKRRMSLPSPPPAKK---LQVQQSSSILPQ 128
Query: 310 DIP 302
D P
Sbjct: 129 DFP 131
>04_04_0977 +
29851086-29851463,29852054-29852551,29853665-29853754,
29854369-29854491
Length = 362
Score = 28.3 bits (60), Expect = 8.7
Identities = 20/51 (39%), Positives = 24/51 (47%)
Frame = -3
Query: 638 PASYLVVELPAGALRGNELSVRHDAVVPREVAALHAAAQQRPQRLQHRAAR 486
PAS+L AG G E V+ A EV L AQQ +R + R AR
Sbjct: 32 PASFLFGNNNAGGAAGTETRVQVAAGAVPEVDQLLKQAQQPGRRKRRRRAR 82
>02_01_0409 - 2978104-2978642,2979106-2979931,2980112-2982178
Length = 1143
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 94 PPPLGSCTRARSQLASHRNSS 156
PP LGSC+R R A H N S
Sbjct: 221 PPELGSCSRLRVLKAGHNNLS 241
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 28.3 bits (60), Expect = 8.7
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +1
Query: 82 PRHGPPPLGSCTRARSQLASHRNSSRLRRRQ*KAMGRFDPGARVVPGAAREPRHRPAHSH 261
P PLG CT A LA+ +S+ + A G G+ +P A PR P +
Sbjct: 143 PSSTSAPLGPCTLAHEGLAAVLATSKAASKSEAASG----GSSAIPPPATAPRFPPPRAM 198
Query: 262 T 264
T
Sbjct: 199 T 199
>02_01_0361 - 2600398-2602780,2602815-2603479,2603553-2603981
Length = 1158
Score = 28.3 bits (60), Expect = 8.7
Identities = 18/53 (33%), Positives = 21/53 (39%)
Frame = +1
Query: 292 GAGAEYPDQPHGGLAILGHRTLVSWWEVTARCTRAPAGCTSARTPTGTTRGPS 450
GA P P G + + W E A A G T A TP G T GP+
Sbjct: 258 GAWDATPKLPGGLVTPTPKKQRSRWDETPASMGSATPGGTGAATPAGYTPGPT 310
>02_01_0353 + 2545982-2549833
Length = 1283
Score = 28.3 bits (60), Expect = 8.7
Identities = 18/53 (33%), Positives = 21/53 (39%)
Frame = +1
Query: 292 GAGAEYPDQPHGGLAILGHRTLVSWWEVTARCTRAPAGCTSARTPTGTTRGPS 450
GA P P G + + W E A A G T A TP G T GP+
Sbjct: 282 GAWDATPKLPGGLVTPTPKKQRSRWDETPASMGSATPGGTGAATPAGYTPGPT 334
>01_01_0420 +
3175544-3176696,3177035-3178581,3179623-3179688,
3179892-3179999
Length = 957
Score = 28.3 bits (60), Expect = 8.7
Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
Frame = -3
Query: 437 VVPVGVRADVQPAGALVHL----AVTSHQETRVRCPSIARPPCGWSGYSAPA 294
V P GV A AL+ L AVTS+ T R CGW G A
Sbjct: 35 VTPAGVPCRPDQAAALLRLKRSFAVTSNSVTAFRSWRAGTDCCGWEGVGCAA 86
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,025,990
Number of Sequences: 37544
Number of extensions: 570825
Number of successful extensions: 2517
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 2360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2512
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -