Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_H12
(941 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0335 - 16903775-16904118,16904203-16904325,16904424-16905993 32 0.58
02_05_0546 + 29889861-29890182,29891057-29892798 31 1.3
12_02_0858 + 23740589-23743233,23743362-23743503,23744778-237449... 31 1.8
01_01_0235 - 1964981-1964997,1965545-1966325 30 2.3
09_02_0466 + 9599389-9599662,9600324-9600643,9600950-9601186,960... 30 3.1
07_03_1369 + 26087947-26088039,26088396-26089073 29 4.1
04_03_0659 - 18453778-18453903,18453976-18454963,18455496-184562... 29 4.1
02_05_0103 - 25847224-25847331,25847785-25847862,25848487-258485... 29 4.1
08_01_0490 + 4284192-4284740 29 5.4
06_01_1057 + 8441881-8442278,8442464-8442548,8442637-8442867 29 5.4
04_01_0610 - 7997406-7998047,7998379-7998426,8000719-8001143,800... 29 5.4
09_02_0317 + 7186148-7186243,7186406-7186572,7186766-7186878,718... 29 7.1
06_02_0096 - 11683368-11684581,11684705-11684773,11685356-116854... 29 7.1
05_04_0029 - 17321378-17321905,17323348-17323525,17323531-173239... 29 7.1
03_01_0256 - 1992298-1993878 29 7.1
04_04_0534 + 26071227-26071811 28 9.4
>07_03_0335 - 16903775-16904118,16904203-16904325,16904424-16905993
Length = 678
Score = 32.3 bits (70), Expect = 0.58
Identities = 21/85 (24%), Positives = 35/85 (41%)
Frame = -2
Query: 280 PSHCRPCLHPEIAWQMQPRHTSVTGGSSETSAKQTPATNSNAQNLITAEAIASKIHKQKK 101
PS RP E +M SV E S K + + + ++ E +
Sbjct: 347 PSRFRPYFVTE---KMANEGISVPNLEGEASEKSSVEDSDSTSSVTDQENHKLVLEDSPN 403
Query: 100 YNIGKMMSMRSQQTYKTQNLKEFPI 26
N+G MS +Q +++QN +E P+
Sbjct: 404 QNLGPQMSQMDEQPHRSQNAREVPL 428
>02_05_0546 + 29889861-29890182,29891057-29892798
Length = 687
Score = 31.1 bits (67), Expect = 1.3
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = -2
Query: 274 HCRPCLHPEIAWQMQPRHTSVTGGSSETSAKQTPA-TNSNAQNLITAEAIASKIHKQKKY 98
HC CL + P++ VT + E A PA T ++Q AE IA K + QK
Sbjct: 251 HCPTCLTKSKGKPLPPKYGKVTRTAVEPKATPPPAGTQVSSQG--AAENIAVKENHQKVA 308
Query: 97 NIGKMMSMRSQQ 62
G +++ S Q
Sbjct: 309 VNGNLLNQNSTQ 320
>12_02_0858 +
23740589-23743233,23743362-23743503,23744778-23744990,
23745083-23745190,23745378-23745587,23745881-23746055,
23746197-23746264
Length = 1186
Score = 30.7 bits (66), Expect = 1.8
Identities = 21/96 (21%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Frame = -2
Query: 328 ASAQ*PHVMRK---RPHVSPSHCRPCLHPEIAWQMQPRHTSVTGGSSETSAKQTPATNSN 158
+S+Q P++ R+ P +P R HP + ++ TS+T E ++ ++
Sbjct: 317 SSSQHPYMARQLLEHPEYNPRMHRT--HPSLQPTIEAASTSMTSHVKEPCYQENVGDSNP 374
Query: 157 AQNLITAEAIASKIHKQKKYNIGKMMSMRSQQTYKT 50
+L+ + A++S+ + K N+G + + Y T
Sbjct: 375 GMSLLRSTAVSSRDVENKSPNLGDRVHADVSEIYST 410
>01_01_0235 - 1964981-1964997,1965545-1966325
Length = 265
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 213 TEVCLGCICQAISGCKQG-LQCEGETCGLFRITWGYWADAGKPTINGLSPDAP-DAYSSC 386
T +CL + + C + +CE TCG + + +W G P N + +P A +SC
Sbjct: 4 TLLCLPLLASLLLLCHRARAECEPATCGNLTVRYPFW--LGGPNFNQSNQSSPSSALASC 61
>09_02_0466 +
9599389-9599662,9600324-9600643,9600950-9601186,
9601278-9601445,9601778-9601966
Length = 395
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -1
Query: 593 LRSVLREDIDALVKHVYIVKR-KFAGAPVASLLVDRHVVIAVDHS 462
L +L+ I+ + KHV ++ R K G P + LL H +++ H+
Sbjct: 244 LELLLQSGIELMGKHVTVIGRSKVVGLPTSLLLQRHHATVSIIHA 288
>07_03_1369 + 26087947-26088039,26088396-26089073
Length = 256
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 129 MASAVIRFCALLLVAGVCFADVSELPPVTEVCLGCICQAISGC 257
M AV+ ALLL AGV AD + + + G C +GC
Sbjct: 1 MKLAVVAVAALLLAAGVASADEFDFFYLVQQWPGSFCDTQAGC 43
>04_03_0659 -
18453778-18453903,18453976-18454963,18455496-18456229,
18456292-18456360,18456528-18456605,18456703-18456789,
18456881-18456931,18457021-18457092,18457177-18457304,
18458194-18458275,18458705-18458754,18459043-18459096,
18459586-18459675,18459903-18459983,18460443-18460538,
18460960-18461022,18461313-18461402,18461630-18461698,
18462051-18462291
Length = 1082
Score = 29.5 bits (63), Expect = 4.1
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = -2
Query: 193 TSAKQTPATNSNAQNLITAEAIASKIHKQKKYNIGK------MMSMRSQQTYKTQNLKE 35
TS+ Q TN ++ T++AIA +IHK+ + K S +Q +T N++E
Sbjct: 114 TSSIQEMETNEQVKSKDTSKAIAERIHKEYTTKVNKHESRTVSNSKSKEQLIRTSNIEE 172
>02_05_0103 -
25847224-25847331,25847785-25847862,25848487-25848528,
25848641-25848763,25848856-25848971,25849062-25849143,
25849233-25849303,25849632-25849689
Length = 225
Score = 29.5 bits (63), Expect = 4.1
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Frame = -2
Query: 232 QPRHTSVTGGSSE---TSAKQTPATNSNAQNLITAE--AIASKIHKQKKYNIGKMMSMRS 68
QP TS+ GGS E + + Q S +T+E A+ SK+ ++K I + M +R
Sbjct: 129 QPHPTSLNGGSEEGLGSLSYQEATKGSRESETVTSEPLALISKLKEEKSSAIQQNMKLRE 188
Query: 67 Q 65
+
Sbjct: 189 E 189
>08_01_0490 + 4284192-4284740
Length = 182
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 228 RDTPPSQGGVPKHRRNRLRQP 166
RD PP GG P H LRQP
Sbjct: 40 RDAPPETGGGPHHNAILLRQP 60
>06_01_1057 + 8441881-8442278,8442464-8442548,8442637-8442867
Length = 237
Score = 29.1 bits (62), Expect = 5.4
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -2
Query: 271 CRPCLHPEIAWQMQPRHTSVTGGSSETSAK-QTPATNSNAQNLITAEAIASK 119
CR L P + ++++PR + T S+ SA + ATN+ +L +A AS+
Sbjct: 66 CRRHLQPCLRFRLRPRQPAATYTSTSASASPRLLATNTTEASLTSATDCASR 117
>04_01_0610 -
7997406-7998047,7998379-7998426,8000719-8001143,
8002301-8002589
Length = 467
Score = 29.1 bits (62), Expect = 5.4
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = -2
Query: 313 PHVMRKRPHVSPSHCRPCLHPEIAWQMQPRHTSVTGGSSETSAKQTPATNSNAQNLITAE 134
PH R R SP+H RP LH + PR T TG ++ T ++ N ++ L+ +
Sbjct: 412 PHTPRPRSPHSPTHPRPRLHHPL-----PRPTR-TGVANVTDDRRGEECNGGSRPLLPSR 465
Query: 133 A 131
A
Sbjct: 466 A 466
>09_02_0317 +
7186148-7186243,7186406-7186572,7186766-7186878,
7187059-7187133,7187215-7187328,7187545-7187612,
7187690-7187773,7187966-7188019,7188104-7188184,
7188279-7188372,7188501-7188574,7188656-7188766,
7188976-7189032,7189119-7189223,7189584-7189687,
7190021-7190186,7190279-7190416
Length = 566
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 336 PTINGLSPDAPDAYSSCTVDPYCAAQTVQNYMRRFGQ 446
P + G + S+ T+DP CA VQ + FGQ
Sbjct: 29 PCLEGKAIRVEFGDSTTTIDPTCANMVVQEFPNTFGQ 65
>06_02_0096 -
11683368-11684581,11684705-11684773,11685356-11685412,
11685553-11685609,11685758-11685817,11686770-11686893
Length = 526
Score = 28.7 bits (61), Expect = 7.1
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = -1
Query: 548 VYIVKRKFAG-APVASLLVDRHVVIAVDHSVAVAVLAKSSHVVLDGLRGAVRVYSAARVG 372
+YI R+ G + + DR H A+A L+ V LD AVR + +ARVG
Sbjct: 251 LYITAREHGGRVQLLAANYDRRWTAKYQH--ALAALSMYPVVDLDA-DAAVRCFPSARVG 307
Query: 371 IRSVR*ETIDSGFSG 327
+ S R ID+ +G
Sbjct: 308 VESHRVLGIDTPLTG 322
>05_04_0029 -
17321378-17321905,17323348-17323525,17323531-17323910,
17323936-17324052
Length = 400
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 465 VVNCYDYMAIH-KKGGYGCTGELPFNYVNVFNQCINVFAQYRS 590
+V C Y+ I+ +GG GC + V C+NV Y S
Sbjct: 350 LVPCLSYLKIYMSRGGVGCFERTMIVGILVIGVCVNVVGTYTS 392
>03_01_0256 - 1992298-1993878
Length = 526
Score = 28.7 bits (61), Expect = 7.1
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +2
Query: 104 FLFVYFRRNGFGCDQVLCVAVGCRSLFRRCFGTPP--CDGGVSRLHLPGYLW 253
F+ F GFG VA+G ++FR F PP D S Y+W
Sbjct: 164 FIAAVFAMQGFGILAGGAVAIGITAIFRSRFPAPPFAADPAASTPPQADYVW 215
>04_04_0534 + 26071227-26071811
Length = 194
Score = 28.3 bits (60), Expect = 9.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 382 AAL*TRTAPRRPSKTT*EDLARTATATEWSTAMTTWRSTRREATGAPA 525
A L TR RRP++ + R A W +TTWR T + G P+
Sbjct: 90 ARLATRRRGRRPARRRRDCAWRRPAAWRW---LTTWRRTASKPDGYPS 134
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,184,741
Number of Sequences: 37544
Number of extensions: 509174
Number of successful extensions: 1460
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1460
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2706104940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -