Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_G22
(908 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC000617-1|AAH00617.1| 264|Homo sapiens NADH dehydrogenase (ubi... 226 7e-59
AK223255-1|BAD96975.1| 264|Homo sapiens NADH dehydrogenase (ubi... 226 7e-59
AF200954-1|AAG17541.1| 264|Homo sapiens NADH dehydrogenase-ubiq... 226 7e-59
AF100743-1|AAD40386.1| 263|Homo sapiens NADH-Ubiquinone reducta... 226 7e-59
AF067139-1|AAC27451.1| 264|Homo sapiens NADH:ubiquinone oxidore... 226 7e-59
AL135819-1|CAB63881.1| 190|Homo sapiens hypothetical protein pr... 190 6e-48
>BC000617-1|AAH00617.1| 264|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q
reductas protein.
Length = 264
Score = 226 bits (553), Expect = 7e-59
Identities = 103/154 (66%), Positives = 128/154 (83%)
Frame = +2
Query: 209 LRKKPPLQETRPTVAKLDPLQKAQLVDFGKYVADCLPKYVQKVQLTAGNELEVLIPPDAV 388
+R++ +TRPTV + + QL FG+YVA+ LPKYVQ+VQ++ NELEV I PD V
Sbjct: 34 VRRESAGADTRPTVRPRNDVAHKQLSAFGEYVAEILPKYVQQVQVSCFNELEVCIHPDGV 93
Query: 389 IPVLSFLKDHHSAQFANLVDIAGMDVPSRSNRFEIIYNILSLRYNARIRVKTYTDELTPV 568
IPVL+FL+DH +AQF +LVD+ +DVP+R NRFEI+YN+LSLR+N+RIRVKTYTDELTP+
Sbjct: 94 IPVLTFLRDHTNAQFKSLVDLTAVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPI 153
Query: 569 DSACDVFKAANWYEREIWDMYGVFFANHPDLRRI 670
+SA VFKAANWYEREIWDM+GVFFANHPDLRRI
Sbjct: 154 ESAVSVFKAANWYEREIWDMFGVFFANHPDLRRI 187
Score = 52.8 bits (121), Expect = 2e-06
Identities = 25/40 (62%), Positives = 27/40 (67%)
Frame = +3
Query: 684 F*GAPFRKDFPLSGYVXXRYDDEXKRVGGRTP*VGQEFXR 803
F G PFRKDFPLSGYV RYDDE KRV + QEF +
Sbjct: 193 FEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRK 232
Score = 38.7 bits (86), Expect = 0.029
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +1
Query: 661 KKDLTDYGFEGHLSGRTSL*VDMXKXXXXXXXXXXXXEPLELAKSSXAFELSAPWGAVP 837
++ LTDYGFEGH + + EP+ELA+ F+L++PW A P
Sbjct: 185 RRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWEAFP 243
>AK223255-1|BAD96975.1| 264|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q
reductas protein.
Length = 264
Score = 226 bits (553), Expect = 7e-59
Identities = 103/154 (66%), Positives = 128/154 (83%)
Frame = +2
Query: 209 LRKKPPLQETRPTVAKLDPLQKAQLVDFGKYVADCLPKYVQKVQLTAGNELEVLIPPDAV 388
+R++ +TRPTV + + QL FG+YVA+ LPKYVQ+VQ++ NELEV I PD V
Sbjct: 34 VRRESAGADTRPTVRPRNDVAHKQLSAFGEYVAEILPKYVQQVQVSCFNELEVCIHPDGV 93
Query: 389 IPVLSFLKDHHSAQFANLVDIAGMDVPSRSNRFEIIYNILSLRYNARIRVKTYTDELTPV 568
IPVL+FL+DH +AQF +LVD+ +DVP+R NRFEI+YN+LSLR+N+RIRVKTYTDELTP+
Sbjct: 94 IPVLTFLRDHTNAQFKSLVDLTAVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPI 153
Query: 569 DSACDVFKAANWYEREIWDMYGVFFANHPDLRRI 670
+SA VFKAANWYEREIWDM+GVFFANHPDLRRI
Sbjct: 154 ESAVSVFKAANWYEREIWDMFGVFFANHPDLRRI 187
Score = 51.2 bits (117), Expect = 5e-06
Identities = 24/40 (60%), Positives = 27/40 (67%)
Frame = +3
Query: 684 F*GAPFRKDFPLSGYVXXRYDDEXKRVGGRTP*VGQEFXR 803
F G PF+KDFPLSGYV RYDDE KRV + QEF +
Sbjct: 193 FEGHPFQKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRK 232
Score = 38.7 bits (86), Expect = 0.029
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +1
Query: 661 KKDLTDYGFEGHLSGRTSL*VDMXKXXXXXXXXXXXXEPLELAKSSXAFELSAPWGAVP 837
++ LTDYGFEGH + + EP+ELA+ F+L++PW A P
Sbjct: 185 RRILTDYGFEGHPFQKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWEAFP 243
>AF200954-1|AAG17541.1| 264|Homo sapiens NADH
dehydrogenase-ubiquinone 30 kDa subunit protein.
Length = 264
Score = 226 bits (553), Expect = 7e-59
Identities = 103/154 (66%), Positives = 128/154 (83%)
Frame = +2
Query: 209 LRKKPPLQETRPTVAKLDPLQKAQLVDFGKYVADCLPKYVQKVQLTAGNELEVLIPPDAV 388
+R++ +TRPTV + + QL FG+YVA+ LPKYVQ+VQ++ NELEV I PD V
Sbjct: 34 VRRESAGADTRPTVRPRNDVAHKQLSAFGEYVAEILPKYVQQVQVSCFNELEVCIHPDGV 93
Query: 389 IPVLSFLKDHHSAQFANLVDIAGMDVPSRSNRFEIIYNILSLRYNARIRVKTYTDELTPV 568
IPVL+FL+DH +AQF +LVD+ +DVP+R NRFEI+YN+LSLR+N+RIRVKTYTDELTP+
Sbjct: 94 IPVLTFLRDHTNAQFKSLVDLTAVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPI 153
Query: 569 DSACDVFKAANWYEREIWDMYGVFFANHPDLRRI 670
+SA VFKAANWYEREIWDM+GVFFANHPDLRRI
Sbjct: 154 ESAVSVFKAANWYEREIWDMFGVFFANHPDLRRI 187
Score = 52.8 bits (121), Expect = 2e-06
Identities = 25/40 (62%), Positives = 27/40 (67%)
Frame = +3
Query: 684 F*GAPFRKDFPLSGYVXXRYDDEXKRVGGRTP*VGQEFXR 803
F G PFRKDFPLSGYV RYDDE KRV + QEF +
Sbjct: 193 FEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRK 232
Score = 38.7 bits (86), Expect = 0.029
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +1
Query: 661 KKDLTDYGFEGHLSGRTSL*VDMXKXXXXXXXXXXXXEPLELAKSSXAFELSAPWGAVP 837
++ LTDYGFEGH + + EP+ELA+ F+L++PW A P
Sbjct: 185 RRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWEAFP 243
>AF100743-1|AAD40386.1| 263|Homo sapiens NADH-Ubiquinone reductase
protein.
Length = 263
Score = 226 bits (553), Expect = 7e-59
Identities = 103/154 (66%), Positives = 128/154 (83%)
Frame = +2
Query: 209 LRKKPPLQETRPTVAKLDPLQKAQLVDFGKYVADCLPKYVQKVQLTAGNELEVLIPPDAV 388
+R++ +TRPTV + + QL FG+YVA+ LPKYVQ+VQ++ NELEV I PD V
Sbjct: 33 VRRESAGADTRPTVRPRNDVAHKQLSAFGEYVAEILPKYVQQVQVSCFNELEVCIHPDGV 92
Query: 389 IPVLSFLKDHHSAQFANLVDIAGMDVPSRSNRFEIIYNILSLRYNARIRVKTYTDELTPV 568
IPVL+FL+DH +AQF +LVD+ +DVP+R NRFEI+YN+LSLR+N+RIRVKTYTDELTP+
Sbjct: 93 IPVLTFLRDHTNAQFKSLVDLTAVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPI 152
Query: 569 DSACDVFKAANWYEREIWDMYGVFFANHPDLRRI 670
+SA VFKAANWYEREIWDM+GVFFANHPDLRRI
Sbjct: 153 ESAVSVFKAANWYEREIWDMFGVFFANHPDLRRI 186
Score = 52.8 bits (121), Expect = 2e-06
Identities = 25/40 (62%), Positives = 27/40 (67%)
Frame = +3
Query: 684 F*GAPFRKDFPLSGYVXXRYDDEXKRVGGRTP*VGQEFXR 803
F G PFRKDFPLSGYV RYDDE KRV + QEF +
Sbjct: 192 FEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRK 231
Score = 38.7 bits (86), Expect = 0.029
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +1
Query: 661 KKDLTDYGFEGHLSGRTSL*VDMXKXXXXXXXXXXXXEPLELAKSSXAFELSAPWGAVP 837
++ LTDYGFEGH + + EP+ELA+ F+L++PW A P
Sbjct: 184 RRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWEAFP 242
>AF067139-1|AAC27451.1| 264|Homo sapiens NADH:ubiquinone
oxidoreductase NDUFS3 subunit protein.
Length = 264
Score = 226 bits (553), Expect = 7e-59
Identities = 103/154 (66%), Positives = 128/154 (83%)
Frame = +2
Query: 209 LRKKPPLQETRPTVAKLDPLQKAQLVDFGKYVADCLPKYVQKVQLTAGNELEVLIPPDAV 388
+R++ +TRPTV + + QL FG+YVA+ LPKYVQ+VQ++ NELEV I PD V
Sbjct: 34 VRRESAGADTRPTVRPRNDVAHKQLSAFGEYVAEILPKYVQQVQVSCFNELEVCIHPDGV 93
Query: 389 IPVLSFLKDHHSAQFANLVDIAGMDVPSRSNRFEIIYNILSLRYNARIRVKTYTDELTPV 568
IPVL+FL+DH +AQF +LVD+ +DVP+R NRFEI+YN+LSLR+N+RIRVKTYTDELTP+
Sbjct: 94 IPVLTFLRDHTNAQFKSLVDLTAVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPI 153
Query: 569 DSACDVFKAANWYEREIWDMYGVFFANHPDLRRI 670
+SA VFKAANWYEREIWDM+GVFFANHPDLRRI
Sbjct: 154 ESAVSVFKAANWYEREIWDMFGVFFANHPDLRRI 187
Score = 52.8 bits (121), Expect = 2e-06
Identities = 25/40 (62%), Positives = 27/40 (67%)
Frame = +3
Query: 684 F*GAPFRKDFPLSGYVXXRYDDEXKRVGGRTP*VGQEFXR 803
F G PFRKDFPLSGYV RYDDE KRV + QEF +
Sbjct: 193 FEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRK 232
Score = 38.7 bits (86), Expect = 0.029
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +1
Query: 661 KKDLTDYGFEGHLSGRTSL*VDMXKXXXXXXXXXXXXEPLELAKSSXAFELSAPWGAVP 837
++ LTDYGFEGH + + EP+ELA+ F+L++PW A P
Sbjct: 185 RRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWEAFP 243
>AL135819-1|CAB63881.1| 190|Homo sapiens hypothetical protein
protein.
Length = 190
Score = 190 bits (463), Expect = 6e-48
Identities = 84/113 (74%), Positives = 101/113 (89%)
Frame = +2
Query: 332 KVQLTAGNELEVLIPPDAVIPVLSFLKDHHSAQFANLVDIAGMDVPSRSNRFEIIYNILS 511
+VQ++ NELEV I PD VIPVL+FL+DH +AQF +LVD+ +DVP+R NRFEI+YN+LS
Sbjct: 1 QVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLTAVDVPTRQNRFEIVYNLLS 60
Query: 512 LRYNARIRVKTYTDELTPVDSACDVFKAANWYEREIWDMYGVFFANHPDLRRI 670
LR+N+RIRVKTYTDELTP++SA VFKAANWYEREIWDM+GVFFANHPDLRRI
Sbjct: 61 LRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFGVFFANHPDLRRI 113
Score = 52.8 bits (121), Expect = 2e-06
Identities = 25/40 (62%), Positives = 27/40 (67%)
Frame = +3
Query: 684 F*GAPFRKDFPLSGYVXXRYDDEXKRVGGRTP*VGQEFXR 803
F G PFRKDFPLSGYV RYDDE KRV + QEF +
Sbjct: 119 FEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRK 158
Score = 38.7 bits (86), Expect = 0.029
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +1
Query: 661 KKDLTDYGFEGHLSGRTSL*VDMXKXXXXXXXXXXXXEPLELAKSSXAFELSAPWGAVP 837
++ LTDYGFEGH + + EP+ELA+ F+L++PW A P
Sbjct: 111 RRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWEAFP 169
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,385,096
Number of Sequences: 237096
Number of extensions: 2552543
Number of successful extensions: 9077
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9071
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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