Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_G18
         (945 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0078 - 1012031-1012084,1012998-1013105,1013610-1013661,101...    30   3.1  
12_02_0703 + 22282219-22282430,22286054-22287620,22287751-222883...    29   4.1  
10_02_0167 - 6100676-6102111,6102174-6102708,6102967-6103975,610...    29   5.4  
09_04_0543 - 18442571-18443111,18443232-18443426,18443507-184440...    29   7.1  

>10_01_0078 -
           1012031-1012084,1012998-1013105,1013610-1013661,
           1013926-1016603
          Length = 963

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +3

Query: 78  RKRTSPIAMKSLXAPLXCPXCVCVHSYHFLVGDISSSLAH-HKLVQYNAIP 227
           R   S +A+     P      V  HS    +GDISS+L+H H+LVQ  A P
Sbjct: 33  RAVASRLALADAPDPAVSDALVACHSR---LGDISSALSHFHRLVQSGAAP 80


>12_02_0703 +
           22282219-22282430,22286054-22287620,22287751-22288371,
           22288434-22288484
          Length = 816

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 16/59 (27%), Positives = 28/59 (47%)
 Frame = -2

Query: 422 DVYSDVVAQAGSAFTLHAHIHVRVADTARSNVHGRLTVERVQRLDTCNNFIIGTAVEVV 246
           D +SD+VA +         +  +  D  RSN     TVE++   D CN  +   A++++
Sbjct: 416 DAWSDIVAASLQLLFRLVALPGKAGDKLRSNKRAINTVEKILGCDECNEKLHVLAIKIL 474


>10_02_0167 -
           6100676-6102111,6102174-6102708,6102967-6103975,
           6104006-6105036
          Length = 1336

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
 Frame = -2

Query: 302 VQRLDTCNNFIIG-TAVEVVLHTLHERYRVVL----DQLVMCQGTGYIA---DKK---MV 156
           V   DT  N IIG TA+   +   H  Y+V+        ++ QG   +A   DK+   MV
Sbjct: 606 VAEFDTAYNTIIGRTALAKFMAASHYAYQVLKIPGPKGTIIIQGNAKLAVQCDKRSLDMV 665

Query: 155 RVNTDAXRTXQRSXERFHCDRRRALSEEI 69
                   T +   +RF  DR++A+ EE+
Sbjct: 666 EQTPSPPATTEPPKKRFAPDRKQAIREEL 694


>09_04_0543 -
           18442571-18443111,18443232-18443426,18443507-18444045,
           18444205-18444375,18444794-18445219
          Length = 623

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -2

Query: 428 LVDVYSDVVAQ-AGSAFTLHAHI-HVRVADTARSNVHGRLTVERVQR 294
           LVD+  +V +Q A  AF   A + H  V+ T RSN HG L   R  R
Sbjct: 51  LVDLSKEVPSQFARPAFQRDASLDHSLVSPTQRSNSHGGLAERRAAR 97


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,587,959
Number of Sequences: 37544
Number of extensions: 330205
Number of successful extensions: 644
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 644
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2717819680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)