Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_G14
(922 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1556.03 |azr1||serine/threonine protein phosphatase Azr1|Sch... 53 5e-08
SPAC227.15 |||protein phosphatase regulatory subunit Reg1 |Schiz... 29 0.93
SPCC320.10 |srp72||signal recognition particle subunit Srp72|Sch... 28 1.6
SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster ... 27 2.8
SPAC26H5.04 |||vacuolar import and degradation protein Vid28|Sch... 27 4.9
SPBC1826.01c |mot1||TATA-binding protein associated factor Mot1|... 26 6.5
SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit ... 26 6.5
SPCC417.10 |||membrane transporter|Schizosaccharomyces pombe|chr... 26 6.5
SPCC737.04 |||S. pombe specific UPF0300 family protein 6|Schizos... 26 8.6
>SPAC1556.03 |azr1||serine/threonine protein phosphatase
Azr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 288
Score = 53.2 bits (122), Expect = 5e-08
Identities = 30/104 (28%), Positives = 48/104 (46%)
Frame = +3
Query: 468 GDDAWFATNFQNXXXXXXXXXXXXWRAYGIDPGEFSSYLMRTCERLVQMGHFKLSEPGDL 647
G+DA+ +N W GIDP FS L+R +++ P L
Sbjct: 50 GEDAFINLRNENYILNAVFDGVGGWANVGIDPSIFSWGLVREIKKVFNNSDEFQPSPLTL 109
Query: 648 LAKSYYELLEHKKPILGSSTACVMILDRNESLMRAANIGDSGYI 779
L+K+Y L + GSSTAC+ + + + + N+GDSG++
Sbjct: 110 LSKAYAALKKSNTVEAGSSTACLTLFNCGNGKLHSLNLGDSGFL 153
Score = 29.9 bits (64), Expect = 0.53
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 778 LVVRXGRVVYRSHEQQHYFNTPYQLSLPP 864
L++R G + Y S Q FN PYQL++ P
Sbjct: 153 LILRNGAIHYASPAQVLQFNMPYQLAIYP 181
>SPAC227.15 |||protein phosphatase regulatory subunit Reg1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 873
Score = 29.1 bits (62), Expect = 0.93
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 811 SHEQQHYFNTPYQL-SLPPPGHDRNVLSDRPESAD 912
S Q Y ++PY + S PPP R L+D P+++D
Sbjct: 674 SLNNQSYSSSPYSVFSHPPPYMGRQSLNDSPQTSD 708
>SPCC320.10 |srp72||signal recognition particle subunit
Srp72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 561
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 296 LHRLIVSSHFITDLLHPSTHYQRFQNDEQPNPMLCT 189
LH I S+ F + LLH + +Y R Q + +LCT
Sbjct: 378 LHYKIQSTGFKSQLLHEAANYWRKQQSCEAKLLLCT 413
>SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 782
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -1
Query: 262 PTFYTQALITKDFKMMNNQTPCYVRKRRISXNL 164
P++ +T+ FK++ N+ P Y+R R + NL
Sbjct: 449 PSYSEVEALTEQFKVLENELPDYMRISRDTPNL 481
>SPAC26H5.04 |||vacuolar import and degradation protein
Vid28|Schizosaccharomyces pombe|chr 1|||Manual
Length = 729
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 591 TCERLVQMGHFKLSEPGDLLAKSYYELLEHKKPILGSSTACVMI 722
TC++ + P +LLAK E LE K PIL + +++
Sbjct: 539 TCQKEESVDFLLKMVPMELLAKILLEKLESKNPILIEPSIYILV 582
>SPBC1826.01c |mot1||TATA-binding protein associated factor
Mot1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1953
Score = 26.2 bits (55), Expect = 6.5
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +3
Query: 582 LMRTCERLVQMGHFKLSEPGDLLAKSYYELLEHKKPILGSSTACVMIL 725
L+ ++LVQ KLS +LL K ++ L+ K L SST+CVM L
Sbjct: 542 LLPIADKLVQE---KLSSCKNLL-KVLWDCLDDVKDDLSSSTSCVMDL 585
>SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit
Sfc4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 26.2 bits (55), Expect = 6.5
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -1
Query: 853 SIGMAY*NSAVVRVSDRRHGRXAQPM*PLSPMFAARIKLSLRSK 722
S+G+AY + A+ R+SD RH + Q L + R+ L K
Sbjct: 880 SLGLAYLHRAMQRLSDNRHYQILQGFTFLYRYYDLRVNEGLGEK 923
>SPCC417.10 |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 508
Score = 26.2 bits (55), Expect = 6.5
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 633 EPGDLLAKSYYELLEHKKPILGSSTACVMIL 725
E G L+A + L HK+ +L + T C+ ++
Sbjct: 339 EFGGLIAFGFLSLFIHKRMVLATITTCIALI 369
>SPCC737.04 |||S. pombe specific UPF0300 family protein
6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 421
Score = 25.8 bits (54), Expect = 8.6
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -3
Query: 530 SICNTNYICILKVSCKPSVVTKLSFTSSPIGNVFRKTT 417
+ICN +Y+C +++ P V K S +F+ T
Sbjct: 250 AICNKSYMCNIQLEQSPEVSVKSSLPKYSNEPIFQSKT 287
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,603,476
Number of Sequences: 5004
Number of extensions: 72464
Number of successful extensions: 162
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 468512460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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