Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_G12
         (987 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0296 + 27639981-27640766                                         30   2.5  
10_08_0817 - 20792817-20793360,20794061-20794156,20795193-20795296     30   3.3  
06_03_0046 - 15852653-15854560                                         29   5.7  
03_05_0206 + 21975077-21975673,21975733-21975831                       28   10.0 
02_03_0076 - 14861337-14861974,14862008-14862119,14862150-14863580     28   10.0 

>02_05_0296 + 27639981-27640766
          Length = 261

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 16/50 (32%), Positives = 21/50 (42%)
 Frame = -3

Query: 268 GTT*XRPVPNTGSPRELAVDAVVQFVLEVLVRRAHAVRG*FHDAGAGGEH 119
           G T  RPVP + SP ++   A         + R H   G  + A A  EH
Sbjct: 127 GATASRPVPASASPADIRAAAAAAAAAAAHLERPHGPTGTAYPATAAAEH 176


>10_08_0817 - 20792817-20793360,20794061-20794156,20795193-20795296
          Length = 247

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 387 CHNCQXYGHSSRXCHARPXCVKC 319
           C+NC+  GH +R C   P C  C
Sbjct: 143 CNNCRKSGHLARNCPNEPVCNLC 165



 Score = 28.7 bits (61), Expect = 7.5
 Identities = 17/56 (30%), Positives = 22/56 (39%)
 Frame = -1

Query: 387 CHNCQXYGHSSRXCHARPXCVKCLDDHAXXXXXXXXXXXTEPPXCVLCRTQGHPAN 220
           C+NC+  GH +R C   P    C   HA           +    C  C+  GH AN
Sbjct: 41  CNNCKRPGHFARDC---PNVALC---HACGLPGHIAAECSSKDLCWNCKEPGHMAN 90


>06_03_0046 - 15852653-15854560
          Length = 635

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 396 PSQCHNCQXYGHSSRXCHARP 334
           P  CH+C   GH +R C  RP
Sbjct: 245 PVWCHSCLEAGHMARFCATRP 265


>03_05_0206 + 21975077-21975673,21975733-21975831
          Length = 231

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -2

Query: 509 IWFSSPSSLPPRVRKSLTSELSVGFP-ESPWXPL 411
           +W S PSS+P   R ++TS    G P ++P+  L
Sbjct: 154 VWSSDPSSIPRATRLTITSADEEGLPVDTPFPEL 187


>02_03_0076 - 14861337-14861974,14862008-14862119,14862150-14863580
          Length = 726

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 396 PSQCHNCQXYGHSSRXCHARP 334
           P +CH+C   GH S  C  RP
Sbjct: 246 PVRCHSCLEAGHMSCFCATRP 266


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,826,664
Number of Sequences: 37544
Number of extensions: 447193
Number of successful extensions: 1082
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1081
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2881826040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)