Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_G04
         (917 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0108 - 860080-860162,860276-860338,860857-860974,861481-86...    30   2.2  
01_05_0353 + 21278753-21278884,21279482-21279535,21279912-212799...    29   5.2  
02_05_0226 + 26971851-26972034,26972734-26972834,26972876-269729...    28   9.0  

>06_01_0108 -
           860080-860162,860276-860338,860857-860974,861481-861492
          Length = 91

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 250 PIRANRPGLLHLKGKAKFDAW 312
           P+   RPG+ +LK + K+DAW
Sbjct: 40  PVTTGRPGIFNLKDRYKWDAW 60


>01_05_0353 +
           21278753-21278884,21279482-21279535,21279912-21279991,
           21280099-21280361,21280837-21280958
          Length = 216

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +2

Query: 215 VCPFXTGHXWRCRSEPID 268
           V P  TGH WRCR EP++
Sbjct: 113 VAPHSTGHVWRCR-EPLE 129


>02_05_0226 +
           26971851-26972034,26972734-26972834,26972876-26972978,
           26973335-26973477,26973525-26973605,26973929-26974015,
           26974097-26974239,26974746-26974896,26974973-26975095,
           26975362-26975445,26975531-26975718,26976726-26976900,
           26977008-26977129,26977231-26977310,26977532-26977590,
           26977921-26978075,26978680-26978858,26980050-26980162,
           26980243-26980413,26980552-26980680,26980756-26980856,
           26980942-26981059,26981739-26981818,26983230-26983302,
           26983865-26983950,26984025-26984076,26984221-26984352,
           26984560-26984628,26984912-26985004,26985806-26985901,
           26986710-26986808,26986894-26986986,26987459-26987608,
           26988391-26988549
          Length = 1323

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = -2

Query: 394 PMEAMRPSTISM*AFWASSFXKXRPVCAKRQIWLYPSSVEDQVYWL-GSASP 242
           P+E      +S+  FW+S      P C   +I  +  SV+ ++  L GS +P
Sbjct: 784 PVEGGLTLELSIAQFWSSGIASHEPTCVDFEIVFHGISVDQKIIGLDGSEAP 835


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,835,424
Number of Sequences: 37544
Number of extensions: 278077
Number of successful extensions: 429
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 429
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)