Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_G04
         (917 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme...    46   3e-05
Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical pr...    31   0.87 
AL023828-1|CAA19448.1|  115|Caenorhabditis elegans Hypothetical ...    29   4.7  

>AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme a
           binding proteinprotein 1 protein.
          Length = 86

 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 30/77 (38%), Positives = 41/77 (53%)
 Frame = +3

Query: 165 TLKNXKALPTDAQLLNLYAXFXQATXGDADPSQ*TWSSTLEG*SQI*RLAXTGRXFXKDD 344
           T+K  K  P++ +LL LYA F Q T GD    +      L+G ++        +   KDD
Sbjct: 11  TVKTLKTSPSNDELLKLYALFKQGTVGDNTTDK-PGMFDLKGKAKW-SAWDEKKGLAKDD 68

Query: 345 AQKAYIEIVEGLIASIG 395
           AQKAY+ +VE LIA  G
Sbjct: 69  AQKAYVALVEELIAKYG 85


>Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical
           protein R06F6.9 protein.
          Length = 385

 Score = 31.5 bits (68), Expect = 0.87
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +1

Query: 253 IRANRPGLLHLKGKAKFDAWHXL 321
           ++  RPG++   G+AK+DAW+ L
Sbjct: 63  VQGKRPGMMDFVGRAKYDAWNTL 85


>AL023828-1|CAA19448.1|  115|Caenorhabditis elegans Hypothetical
           protein Y17G7B.1 protein.
          Length = 115

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 168 LKNXKALPTDAQLLNLYAXFXQATXGD 248
           ++  K+ PTD + L LYA + QA  GD
Sbjct: 22  MRRLKSEPTDRERLKLYALYKQALHGD 48


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,939,397
Number of Sequences: 27780
Number of extensions: 259282
Number of successful extensions: 424
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 423
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)