Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_F21
         (917 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0824 - 32243495-32244319,32244449-32244859                       38   0.015
11_01_0750 - 6315126-6315896,6316371-6316784                           32   0.73 
11_01_0771 + 6453130-6454488                                           29   3.9  
03_05_0294 + 22855503-22855946,22856346-22856399                       29   6.8  
10_08_0460 - 18098187-18098248,18098331-18098399,18098468-180994...    28   9.0  
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502...    28   9.0  
02_02_0461 + 10534733-10536302,10536347-10536396,10536845-10538227     28   9.0  

>01_06_0824 - 32243495-32244319,32244449-32244859
          Length = 411

 Score = 37.5 bits (83), Expect = 0.015
 Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
 Frame = +3

Query: 435 ANKIYVSDQYKLADAFSRT-ANLFRSEVDNINFSAP-KNAADIINRWADEQTQGHIKTPV 608
           AN ++V    +L  A++R  A+ +R+E   ++F    + A   IN W +  T G IK  +
Sbjct: 102 ANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFESATAGRIKDFL 161

Query: 609 SEDKLTPPRPLQCLTSFSSRGHWHVPFNA 695
            +D +    P     +   +G W   F+A
Sbjct: 162 PKDAVDRATPAVLGNALYFKGDWESKFDA 190


>11_01_0750 - 6315126-6315896,6316371-6316784
          Length = 394

 Score = 31.9 bits (69), Expect = 0.73
 Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
 Frame = +3

Query: 387 LLNQRYAEFDPKFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINF-SAPKNAADII 560
           +L  R     P+ L  A  ++      L+  F   A N++ S     +F + P++A D I
Sbjct: 88  VLRDRSTSGGPR-LAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQI 146

Query: 561 NRWADEQTQGHIKTPVSEDKLTPPRPLQCLTSFSSRGHW 677
           N W  + T+G + T +    +     L   ++   RG W
Sbjct: 147 NSWVKDSTKGTVTTLLPAGTIDQNTGLVLGSALYFRGRW 185


>11_01_0771 + 6453130-6454488
          Length = 452

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 17/64 (26%), Positives = 26/64 (40%)
 Frame = +2

Query: 530 QRSEECR*YHQPLGGRTDSRTHKDSCQRRQIDPATAVAMFNVIFFQGALARSVQRK*NRX 709
           +++EE R        R   +   D    R + P TAV + N I+F+G   R         
Sbjct: 168 EKAEEARKQINAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRPFNESDTER 227

Query: 710 KRFH 721
           K F+
Sbjct: 228 KPFY 231


>03_05_0294 + 22855503-22855946,22856346-22856399
          Length = 165

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 239 ADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREIL 346
           A   NV  SPL + + LSL  +GAG  +++++  +L
Sbjct: 41  AGGSNVAFSPLSLHVALSLVAAGAGGATRDQLVSLL 76


>10_08_0460 -
           18098187-18098248,18098331-18098399,18098468-18099434,
           18100089-18100808,18100942-18101031,18101076-18101138,
           18101223-18101366,18101471-18101527,18101606-18101680,
           18101757-18101836,18101937-18102050,18102166-18102258,
           18102470-18102553,18102812-18102859,18105207-18105337,
           18105903-18106135
          Length = 1009

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 11/48 (22%), Positives = 24/48 (50%)
 Frame = +1

Query: 238 SRRQECDSVSSRRDAAAFLVRVWSRCTVQGRDKGNPWGRGRLKSQHTH 381
           ++++  + V+ ++     LV+   +CT+  ++ G  W   RL   H H
Sbjct: 539 NKKKSNEQVTEQQRETVVLVKTNCKCTMVAKEVGQFWQISRLDLNHNH 586


>03_05_0293 +
           22849103-22849513,22849670-22849756,22850156-22850284,
           22850507-22851262,22853474-22854250
          Length = 719

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +2

Query: 248 KNVIASPLGVMLLLSLYESGAGAQSKEEIREIL 346
           +NV  SPL + + LSL  +GAG  +++++   L
Sbjct: 35  RNVAFSPLSLHVALSLVAAGAGGATRDQLASAL 67


>02_02_0461 + 10534733-10536302,10536347-10536396,10536845-10538227
          Length = 1000

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
 Frame = +3

Query: 495 NLFRSEVDNINFSAPKNAADI--IN-RWADEQTQGHIKTPVSEDKLTPPRPLQCLTSFSS 665
           NL  +  D    SA KN  ++  +N +W+  ++Q H    V +  L PP  L+CLT +  
Sbjct: 561 NLGATSKDIAAESAIKNKKNLDRLNLKWSSVRSQDHNDIEVLQ-VLIPPTSLKCLTLYGY 619

Query: 666 RG----HWHVPFN 692
            G    +W  P N
Sbjct: 620 LGQSLPNWFYPHN 632


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,871,851
Number of Sequences: 37544
Number of extensions: 445645
Number of successful extensions: 1196
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)