Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_F13
(818 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0899 - 8689125-8689383,8689540-8689826 31 0.83
02_03_0049 + 14421408-14421942,14421988-14422842,14423847-144241... 31 1.1
02_01_0075 - 522554-522616,522742-522748,523033-523136,523237-52... 31 1.1
07_01_1078 - 9707125-9707640,9708091-9708306,9708312-9709685,970... 31 1.5
07_01_0080 + 587674-588510 31 1.5
08_01_0722 + 6412654-6412860,6413142-6413687,6413745-6413877,641... 30 2.5
04_04_0946 - 29579779-29580004,29580098-29580210 30 2.5
05_03_0313 + 12200743-12200955,12201238-12201622,12201997-122022... 29 3.4
02_04_0275 - 21469391-21470650 29 3.4
01_01_1195 - 9567023-9567789,9567871-9568120 29 3.4
12_02_0305 - 17235832-17236379,17237345-17237444 29 4.4
12_02_0396 + 18577574-18578056,18578094-18578723 29 5.9
07_01_0711 + 5374717-5374992,5375022-5375277,5375317-5375384,537... 29 5.9
03_01_0350 - 2753217-2754152 29 5.9
05_03_0577 + 15671570-15672432,15672571-15672785,15672825-156729... 28 7.8
>12_01_0899 - 8689125-8689383,8689540-8689826
Length = 181
Score = 31.5 bits (68), Expect = 0.83
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 145 PRCQRWRCPQWPWHLANYMSQPPTKLPRSPPSSKRGSLEPRPRL 276
P C R P+ PW +A +PP PP+ G+ RP L
Sbjct: 38 PPCARLLLPEPPWGMAALPPEPPWGAAAHPPAPHWGAGPSRPAL 81
>02_03_0049 +
14421408-14421942,14421988-14422842,14423847-14424151,
14424469-14424984
Length = 736
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 142 LPRCQRWRCPQWPWHLANYMSQPPTKLPRSPPSSKR 249
+PR + WR P LA + QP K P S P SK+
Sbjct: 412 MPRNRYWRTPVKSPVLAKKLEQPAQKRPSSAPKSKK 447
>02_01_0075 -
522554-522616,522742-522748,523033-523136,523237-523368,
525209-525401,525978-526330,526693-526791,526864-526935,
527062-527213,527338-527386,527755-527885,528067-528307,
528392-528565,528656-528797,529236-529282,529370-529450,
530170-530271,530345-530440,531437-531444,531575-531616,
531830-531894,534761-534853,534888-534959,535303-535509,
536318-537226,537503-538158
Length = 1429
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = -3
Query: 411 PSLRANFPLRPWRRTPPSPQPGCSSSHKHERYHHQCSRHDQSLLDQP 271
P R + PL P R PPSP P SS K + Q D++ LD P
Sbjct: 17 PPRRLSSPL-PRSRAPPSPSPSTSSRAKPRKVAAQ-PETDEAALDNP 61
>07_01_1078 -
9707125-9707640,9708091-9708306,9708312-9709685,
9709704-9710044,9710120-9710198
Length = 841
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 142 LPRCQRWRCPQWPWHLANYMSQPPTKLPRSPPSSKRG 252
+P+ + WR P + + QP K P SPP SK+G
Sbjct: 635 MPKNRYWRTPVKSPVPSMKLEQPAQKKPSSPPKSKKG 671
>07_01_0080 + 587674-588510
Length = 278
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 664 PPPXXXGGXFXXXXXXPPPPPXXGGXPPXXFFXXXPP 554
PP G F PPPPP G PP PP
Sbjct: 79 PPRLGGDGMFRRPPPPPPPPPSSGSPPPPPPPPPPPP 115
>08_01_0722 +
6412654-6412860,6413142-6413687,6413745-6413877,
6413917-6414035,6414128-6414883,6415209-6415258,
6415560-6416679
Length = 976
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 142 LPRCQRWRCPQWPWHLANYMSQPPTKLPRSPPSSKRGSLEP 264
+PR + WR P P A + Q K P SPP K+ + P
Sbjct: 552 MPRNRYWRLPVKPPIPAKKLEQLAQKKPPSPPKPKKPKVGP 592
>04_04_0946 - 29579779-29580004,29580098-29580210
Length = 112
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -3
Query: 333 HKHERYHHQCSRHDQSLLDQPWARLQGSSLR 241
H H R+HHQ + ++ PW +G +LR
Sbjct: 81 HHHHRHHHQQPQPRPAIDANPWGTARGPALR 111
>05_03_0313 +
12200743-12200955,12201238-12201622,12201997-12202274,
12202359-12202976
Length = 497
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 142 LPRCQRWRCPQWPWHLANYMSQPPTKLPRSPPSSKR 249
+P+ + W+ P P LA + QP K P S P K+
Sbjct: 440 MPKNRYWKMPVEPPILAKKLEQPAQKKPPSAPKPKK 475
>02_04_0275 - 21469391-21470650
Length = 419
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -3
Query: 375 RRTPPSPQPGCSSSHKHERYHHQCSRHDQSLLDQP 271
RRT + G SS+H H RY Q SRH + QP
Sbjct: 347 RRTAMATDVGTSSNH-HVRYRFQDSRHCHAAPQQP 380
>01_01_1195 - 9567023-9567789,9567871-9568120
Length = 338
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -3
Query: 417 RXPSLRANFPLRPWRRTPPSPQPGCSSSHKHERYHHQCS 301
R PS + P P PP PQP + H H RY Q S
Sbjct: 160 RKPSSSSASPA-PAPAPPPPPQPVVALHHHHHRYSQQYS 197
>12_02_0305 - 17235832-17236379,17237345-17237444
Length = 215
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 202 SQPPTKLPRSPPSSKRGSLEPRPRLI 279
SQPPT P PP+ GS PR +I
Sbjct: 114 SQPPTIAPTQPPTPSGGSQCPRENVI 139
>12_02_0396 + 18577574-18578056,18578094-18578723
Length = 370
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 142 LPRCQRWRCPQWPWHLANYMSQPPTKLPRSPPSSKR 249
+PR + WR P P A + QP + P S P K+
Sbjct: 313 MPRNRYWRTPVKPSTPAKKLEQPAQRKPPSAPKPKK 348
>07_01_0711 +
5374717-5374992,5375022-5375277,5375317-5375384,
5375556-5376287,5377013-5377270
Length = 529
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 142 LPRCQRWRCPQWPWHLANYMSQPPTKLPRSPPSSKRGS 255
+PR + W+ P A + QP + P S P K+GS
Sbjct: 409 MPRNRYWKTPVKSSTPAKKLEQPAQRKPSSAPKPKKGS 446
>03_01_0350 - 2753217-2754152
Length = 311
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -3
Query: 420 FRXPSLRANFPLRPWRRTPPSPQPGCSSSHKHERYHHQCS-RHDQSLLDQPWARLQG 253
F P+ A P+RP T P S+ +H +HH + R D L++ ++G
Sbjct: 177 FTPPAAAA--PVRPTSATHPDDDEDAESARRHHHHHHNHNHRPDDELINSIVIEVRG 231
>05_03_0577 +
15671570-15672432,15672571-15672785,15672825-15672954,
15672990-15673794,15674505-15674715,15674829-15675436
Length = 943
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 139 LLPRCQRWRCPQWPWHLANYMSQPPTKLPRSPPSSKRGS 255
++PR + W+ P P A + Q K P S P ++GS
Sbjct: 635 MMPRNRYWKTPVKPPIPAKKLEQSAQKKPPSAPKPRKGS 673
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,741,706
Number of Sequences: 37544
Number of extensions: 439961
Number of successful extensions: 2111
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1947
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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