Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_F11
         (932 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1680 - 39123536-39123628,39123726-39123821,39123941-391240...    31   1.7  
03_03_0040 - 13999040-13999179,13999524-13999638,13999759-139998...    29   4.0  
01_01_1197 - 9630506-9630681,9630774-9630805,9630894-9630988,963...    29   4.0  

>01_06_1680 -
           39123536-39123628,39123726-39123821,39123941-39124093,
           39124273-39124382,39124601-39124757,39124867-39124877,
           39125138-39125228,39125401-39125496,39125605-39125724,
           39125914-39125978,39126066-39126168,39126406-39126631,
           39126714-39126790
          Length = 465

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 22/68 (32%), Positives = 30/68 (44%)
 Frame = +2

Query: 377 SIEGVPLAKIPHDWADYEPDNAGGDENXILMYPDGXFADVNCTDTFQYVCYXKKTSTVAM 556
           SI G  L   P D+ D EPD      + I+        D  C    + +C+ KK  TV  
Sbjct: 347 SIYGKQLMIDPQDFQDAEPDILANSASEIINRIKEN--DDQCAMALRSLCHRKKGLTVEE 404

Query: 557 SSCGSVDS 580
           +S  S+DS
Sbjct: 405 ASLISIDS 412


>03_03_0040 -
           13999040-13999179,13999524-13999638,13999759-13999818,
           14000007-14000060,14000274-14000333,14000418-14000480,
           14000552-14000595,14000671-14000755,14000904-14001028,
           14001368-14001432,14001460-14001518,14001678-14001743,
           14001870-14001935,14002019-14002105,14002168-14002257,
           14002378-14002440,14003153-14003419
          Length = 502

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = +1

Query: 205 SSYLARGSIKMSFGRICIGFTSG 273
           S +LA+G I + FGRI +GF++G
Sbjct: 164 SLHLAKGVIMLYFGRILLGFSTG 186


>01_01_1197 -
           9630506-9630681,9630774-9630805,9630894-9630988,
           9631569-9631642,9631732-9631843,9631967-9632030,
           9632210-9632275,9632396-9632526,9632884-9633021,
           9633115-9633227,9633306-9633471,9633588-9633701,
           9633791-9633853,9633953-9634060,9634143-9634259,
           9634343-9634505,9634646-9634743,9634852-9634949,
           9635054-9635190,9635309-9635530,9635625-9635830,
           9636758-9636845,9638085-9638668
          Length = 1054

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = -1

Query: 380 WNGSLLSRITHEYQCRCHTNSCYLLSKTACCFLKLRPEVKP 258
           W G L   I  + +C  +      L +T CC L++ P++ P
Sbjct: 83  WVGGLHRSIRRKCRCHVYRERGTTLGETNCCHLQVGPDLPP 123


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,601,662
Number of Sequences: 37544
Number of extensions: 383345
Number of successful extensions: 760
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)