Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_F11
         (932 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00052-1|AAK95880.2|  308|Caenorhabditis elegans Hypothetical pr...    38   0.014
AF099919-5|AAC68804.1|  188|Caenorhabditis elegans Hypothetical ...    31   1.6  
AL031627-2|CAA20953.1|  179|Caenorhabditis elegans Hypothetical ...    30   2.7  
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ...    29   3.6  
AL031627-8|CAA20960.2|  222|Caenorhabditis elegans Hypothetical ...    29   4.8  
AC006663-2|AAF39900.2|  603|Caenorhabditis elegans Hypothetical ...    29   6.3  
Z81083-2|CAB03101.3|  646|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>U00052-1|AAK95880.2|  308|Caenorhabditis elegans Hypothetical
           protein K02F3.5 protein.
          Length = 308

 Score = 37.5 bits (83), Expect = 0.014
 Identities = 27/107 (25%), Positives = 48/107 (44%)
 Frame = +2

Query: 215 WQEARLRCRLEGSVLASPLDAALKSSMLSLITNNKSSCGIYTGIHALFSRGDFRSIEGVP 394
           W  A  +C   G+ LAS         +  L+  N+++   + G++ +     FR+ +G P
Sbjct: 206 WYTASEKCIGYGAHLASIHSRLELGFVQRLVPVNQTA---WIGVNDIQKENVFRNSDGTP 262

Query: 395 LAKIPHDWADYEPDNAGGDENXILMYPDGXFADVNCTDTFQYVCYXK 535
           +    + W   +PDN   +EN + +   G + D  C  T  +VC  K
Sbjct: 263 VDF--YKWGKKQPDNQEHNENCVEVDHSGQWTDKLCIITRPFVCKKK 307


>AF099919-5|AAC68804.1|  188|Caenorhabditis elegans Hypothetical
           protein F40G9.10 protein.
          Length = 188

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
 Frame = +2

Query: 158 YTYFRNINGWLKLQEIPAIWQEARLRCRLEGSVLAS--PLDAALKSSMLSLITNNKSSCG 331
           YT+F   N   K     A + +A   CR EGS LAS   L        LS   N  +S  
Sbjct: 52  YTWFSYTNFCYKSTARAANFNDAHNACRSEGSELASIHSLTENQFLVQLSAAGNRVNSKT 111

Query: 332 IYTGIHALFSRGDFRSIEGVPLAKIPHDWADYEPDN 439
            Y  I  +F   ++   +G  +  +  +WA  EP+N
Sbjct: 112 NYVMIGLIFENREWSWTDGSSVNYL--NWAAGEPNN 145


>AL031627-2|CAA20953.1|  179|Caenorhabditis elegans Hypothetical
           protein Y102A5C.7 protein.
          Length = 179

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +2

Query: 428 EPDNAGGDENXILMYPDGXFADVNC--TDTFQYVC 526
           EP+N GG E  +++   G  +D  C  TD   YVC
Sbjct: 140 EPNNVGGTEQCLVLTWTGLMSDQTCARTDYVGYVC 174


>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
            protein C08G9.2 protein.
          Length = 2224

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = -1

Query: 401  LPVELLQWNGS-LLSRITHEYQCRCHTNSCYLLSKTACCFLKLRPEVKPIQIL 246
            +P+ L   +GS  +    H Y C  H++ CY    T+C F   +  +KPI+ L
Sbjct: 1329 IPIMLASVDGSSCVVGCRHHYDCT-HSSCCYNGCGTSCQFETRQLAIKPIKTL 1380


>AL031627-8|CAA20960.2|  222|Caenorhabditis elegans Hypothetical
           protein Y102A5C.17 protein.
          Length = 222

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +2

Query: 428 EPDNAGGDENXILMYPDGXFADVNC--TDTFQYVC 526
           EP+N GG E  +++   G  +D  C  TD   YVC
Sbjct: 183 EPNNVGGMEQCLVLTWTGLMSDQTCARTDYVGYVC 217


>AC006663-2|AAF39900.2|  603|Caenorhabditis elegans Hypothetical
           protein H24K24.4 protein.
          Length = 603

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +1

Query: 244 GRICIGFTSGRSFKKQHAV 300
           G IC+GF  GR  K QH V
Sbjct: 200 GEICVGFVGGRFSKNQHFV 218


>Z81083-2|CAB03101.3|  646|Caenorhabditis elegans Hypothetical
           protein F44F1.3 protein.
          Length = 646

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 326 CGIYTGIHALFSRGDFRSIEGVPLAKIP 409
           CG Y GIH   S   F ++ G P+  IP
Sbjct: 210 CGNYKGIHGFQSLSAFSALTGSPVLLIP 237


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,497,111
Number of Sequences: 27780
Number of extensions: 342001
Number of successful extensions: 709
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)