Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_F08
(854 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.15
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.15
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.15
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 25 0.97
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.4
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.4
Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 3.2
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 29 3.2
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 29 3.2
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 29 3.2
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 29 3.2
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 29 3.2
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 3.2
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 3.2
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 3.2
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 3.2
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 3.2
Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical pr... 29 4.2
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 4.2
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 4.2
AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical... 29 4.2
AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical... 29 4.2
AC006603-3|AAF39750.1| 204|Caenorhabditis elegans Hypothetical ... 29 5.6
AC006611-4|AAK85456.2| 328|Caenorhabditis elegans Hypothetical ... 23 6.6
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 9.7
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 28 9.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 9.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 9.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 9.7
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.9 bits (74), Expect = 0.15
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 703 PPXGGXKKKXQPXPPXXXGXXPPPPPP 623
PP GG P PP PPPPPP
Sbjct: 763 PPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 702 PXGGXKKKKXNPXPPXXXXXXPPPPPPXPXXXXF 601
P GG P PP PPPPP P F
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 780
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.9 bits (74), Expect = 0.15
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 703 PPXGGXKKKXQPXPPXXXGXXPPPPPP 623
PP GG P PP PPPPPP
Sbjct: 763 PPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 702 PXGGXKKKKXNPXPPXXXXXXPPPPPPXPXXXXF 601
P GG P PP PPPPP P F
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 780
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.9 bits (74), Expect = 0.15
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 703 PPXGGXKKKXQPXPPXXXGXXPPPPPP 623
PP GG P PP PPPPPP
Sbjct: 346 PPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 702 PXGGXKKKKXNPXPPXXXXXXPPPPPPXPXXXXF 601
P GG P PP PPPPP P F
Sbjct: 330 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 363
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 25.4 bits (53), Expect(2) = 0.97
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3
Query: 669 PXPPXXXXXXPPPPPPXP 616
P P PPPPPP P
Sbjct: 541 PPPVGMANGGPPPPPPLP 558
Score = 24.2 bits (50), Expect(2) = 0.97
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -3
Query: 639 PPPPPPXPXXXXFF 598
PPPPPP P F
Sbjct: 576 PPPPPPPPPPSFMF 589
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2
Query: 703 PPXGGXKKKXQPXPPXXXGXXPPPPPP 623
PP G + P PP G PPPPPP
Sbjct: 278 PPTPGMTPR--PPPPPSSGMWPPPPPP 302
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 670 PXPPXXXGXXPPPPPP 623
P PP G PPPPPP
Sbjct: 372 PAPPSGHGMIPPPPPP 387
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 669 PXPPXXXXXXPPPPPPXP 616
P PP PPPPPP P
Sbjct: 287 PPPPPSSGMWPPPPPPPP 304
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2
Query: 703 PPXGGXKKKXQPXPPXXXGXXPPPPPP 623
PP G + P PP G PPPPPP
Sbjct: 288 PPTPGMTPR--PPPPPSSGMWPPPPPP 312
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 670 PXPPXXXGXXPPPPPP 623
P PP G PPPPPP
Sbjct: 382 PAPPSGHGMIPPPPPP 397
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 669 PXPPXXXXXXPPPPPPXP 616
P PP PPPPPP P
Sbjct: 297 PPPPPSSGMWPPPPPPPP 314
>Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical
protein Y41E3.16 protein.
Length = 720
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/70 (32%), Positives = 26/70 (37%), Gaps = 1/70 (1%)
Frame = -2
Query: 409 FXKXKXPPPPXXXKKKKIFFXPXFXXGGGPXQKIXXXFLXGKKXPPXXXKKPPPPPXXX- 233
F PPPP K I P GGG I + PP PP PP
Sbjct: 491 FFNQPLPPPPAHPPK--IGAHPLVMGGGGGVPMIPMVPM-----PPGMIGLPPGPPGRRR 543
Query: 232 KXXFKKPPPK 203
K F +PPP+
Sbjct: 544 KSRFDQPPPE 553
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 670 PXPPXXXGXXPPPPPP 623
P PP G PPPPPP
Sbjct: 105 PPPPPMFGAPPPPPPP 120
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 670 PXPPXXXGXXPPPPPP 623
P PP G PPPPPP
Sbjct: 799 PLPPISSGAPPPPPPP 814
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 670 PXPPXXXGXXPPPPPP 623
P PP G PPPPPP
Sbjct: 799 PLPPISSGAPPPPPPP 814
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 670 PXPPXXXGXXPPPPPP 623
P PP G PPPPPP
Sbjct: 56 PRPPIGYGAPPPPPPP 71
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 670 PXPPXXXGXXPPPPPP 623
P PP G PPPPPP
Sbjct: 56 PRPPIGYGAPPPPPPP 71
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 670 PXPPXXXGXXPPPPPP 623
P PP G PPPPPP
Sbjct: 56 PRPPIGYGAPPPPPPP 71
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -3
Query: 693 GXKKKKXNPXPPXXXXXXPPPPPPXP 616
G K +P PP PPPPP P
Sbjct: 288 GPSSMKMSPIPPPPIKEESPPPPPPP 313
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -3
Query: 693 GXKKKKXNPXPPXXXXXXPPPPPPXP 616
G K +P PP PPPPP P
Sbjct: 288 GPSSMKMSPIPPPPIKEESPPPPPPP 313
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 670 PXPPXXXGXXPPPPPP 623
P PP G PPPPPP
Sbjct: 41 PPPPPMCGCAPPPPPP 56
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 669 PXPPXXXXXXPPPPPPXP 616
P PP PPPPPP P
Sbjct: 42 PPPPMCGCAPPPPPPPPP 59
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 670 PXPPXXXGXXPPPPPP 623
P PP G PPPPPP
Sbjct: 238 PLPPVGAGAPPPPPPP 253
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 670 PXPPXXXGXXPPPPPP 623
P PP G PPPPPP
Sbjct: 224 PLPPVGAGAPPPPPPP 239
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 670 PXPPXXXGXXPPPPPP 623
P PP G PPPPPP
Sbjct: 224 PLPPVGAGAPPPPPPP 239
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 670 PXPPXXXGXXPPPPPP 623
P PP G PPPPPP
Sbjct: 580 PPPPPMLGGPPPPPPP 595
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 670 PXPPXXXGXXPPPPPP 623
P PP G PPPPPP
Sbjct: 581 PPPPMLGGPPPPPPPP 596
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 669 PXPPXXXXXXPPPPPPXP 616
P PP PPPPPP P
Sbjct: 579 PPPPPPMLGGPPPPPPPP 596
>Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 669 PXPPXXXXXXPPPPPPXP 616
P PP PPPPPP P
Sbjct: 241 PEPPREKSVPPPPPPPPP 258
>Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 669 PXPPXXXXXXPPPPPPXP 616
P PP PPPPPP P
Sbjct: 256 PEPPREKSVPPPPPPPPP 273
>Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical
protein T23F1.5 protein.
Length = 1262
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 669 PXPPXXXXXXPPPPPPXP 616
P PP PPPPPP P
Sbjct: 539 PAPPLINPYIPPPPPPHP 556
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 669 PXPPXXXXXXPPPPPPXP 616
P PP PPPPPP P
Sbjct: 65 PPPPPPPPMCPPPPPPMP 82
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 669 PXPPXXXXXXPPPPPPXP 616
P PP PPPPPP P
Sbjct: 72 PPPPPPPMPCPPPPPPMP 89
>AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 669 PXPPXXXXXXPPPPPPXP 616
P PP PPPPPP P
Sbjct: 241 PEPPREKSVPPPPPPPPP 258
>AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 669 PXPPXXXXXXPPPPPPXP 616
P PP PPPPPP P
Sbjct: 256 PEPPREKSVPPPPPPPPP 273
>AC006603-3|AAF39750.1| 204|Caenorhabditis elegans Hypothetical
protein B0524.5 protein.
Length = 204
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -2
Query: 286 KKXPPXXXKKPPPPPXXXKXXFKKPPPKXKK 194
+K PP KPP P K + PP+ KK
Sbjct: 26 RKPPPATPAKPPAPQKTLKVAPRAAPPRKKK 56
>AC006611-4|AAK85456.2| 328|Caenorhabditis elegans Hypothetical
protein C30F8.3 protein.
Length = 328
Score = 23.4 bits (48), Expect(2) = 6.6
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = -3
Query: 669 PXPPXXXXXXPPPPPP 622
P P PPPPPP
Sbjct: 64 PFAPQVFTQPPPPPPP 79
Score = 23.4 bits (48), Expect(2) = 6.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 639 PPPPPPXP 616
PPPPPP P
Sbjct: 73 PPPPPPPP 80
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 670 PXPPXXXGXXPPPPPPXT 617
P PP PPPPPP T
Sbjct: 355 PAPPPPPPPPPPPPPPQT 372
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -2
Query: 286 KKXPPXXXKKPPPPPXXXKXXFKKPPPKXKK 194
++ P K PPP P K K PP + ++
Sbjct: 347 RRRSPSASKSPPPAPKRAKSRSKSPPARRRR 377
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -2
Query: 277 PPXXXKKPPPPPXXXKXXFKKPPP 206
PP ++ PPPP K PPP
Sbjct: 22 PPPSPRRAPPPPPHRKPASLSPPP 45
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 703 PPXGGXKKKXQPXPPXXXGXXPPPPPP 623
PP GG PP G PPPPPP
Sbjct: 283 PPAGGSP------PPPRAGSPPPPPPP 303
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/69 (26%), Positives = 21/69 (30%)
Frame = -2
Query: 391 PPPPXXXKKKKIFFXPXFXXGGGPXQKIXXXFLXGKKXPPXXXKKPPPPPXXXKXXFKKP 212
PPPP P G P G PP PPPPP + ++
Sbjct: 289 PPPPRAGSPP-----PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERS 343
Query: 211 PPKXKKXXG 185
PP G
Sbjct: 344 PPTGSPPTG 352
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 703 PPXGGXKKKXQPXPPXXXGXXPPPPPP 623
PP GG PP G PPPPPP
Sbjct: 304 PPAGGSP------PPPRAGSPPPPPPP 324
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/69 (26%), Positives = 21/69 (30%)
Frame = -2
Query: 391 PPPPXXXKKKKIFFXPXFXXGGGPXQKIXXXFLXGKKXPPXXXKKPPPPPXXXKXXFKKP 212
PPPP P G P G PP PPPPP + ++
Sbjct: 310 PPPPRAGSPP-----PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERS 364
Query: 211 PPKXKKXXG 185
PP G
Sbjct: 365 PPTGSPPTG 373
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 703 PPXGGXKKKXQPXPPXXXGXXPPPPPP 623
PP GG PP G PPPPPP
Sbjct: 289 PPAGGSP------PPPRAGSPPPPPPP 309
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/69 (26%), Positives = 21/69 (30%)
Frame = -2
Query: 391 PPPPXXXKKKKIFFXPXFXXGGGPXQKIXXXFLXGKKXPPXXXKKPPPPPXXXKXXFKKP 212
PPPP P G P G PP PPPPP + ++
Sbjct: 295 PPPPRAGSPP-----PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERS 349
Query: 211 PPKXKKXXG 185
PP G
Sbjct: 350 PPTGSPPTG 358
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,163,562
Number of Sequences: 27780
Number of extensions: 227612
Number of successful extensions: 5110
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2852
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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