Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_E23
(932 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0480 + 34218403-34218405,34219071-34219127,34220047-342203... 77 3e-14
02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393 77 3e-14
05_01_0103 + 686770-687017,687120-687270 76 4e-14
03_06_0174 - 32141956-32141985,32143658-32144452,32147645-321477... 76 4e-14
04_04_0752 - 27791126-27791167,27791792-27791863,27792771-277928... 76 5e-14
07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318 73 2e-13
12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666 73 4e-13
03_06_0479 + 34217170-34217172,34217337-34217786 71 1e-12
10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378 57 2e-08
07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084 40 0.004
03_01_0596 + 4398920-4398982,4399395-4399797,4400234-4400340,440... 28 9.2
02_03_0407 - 18675368-18675378,18676047-18676977,18677323-186773... 28 9.2
>03_06_0480 +
34218403-34218405,34219071-34219127,34220047-34220312,
34220402-34220552
Length = 158
Score = 76.6 bits (180), Expect = 3e-14
Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Frame = +3
Query: 147 VSDACKTHLRXRSRXDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGGTGEC 323
+ D CK + + HR++ F + ++ K+I V+ +G+R YE F L +G +C
Sbjct: 29 IHDDCKLKFN-ELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPEG---DC 84
Query: 324 RYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 485
R+ ++DF++ T+E K ++F + W PD AKV+ KMLY+SS + KK L
Sbjct: 85 RFAIYDFDFL-----TAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKEL 133
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 475 KSPLXGVQKYIQATDLSEASQEAVEEKLR 561
K L G+Q +QATD E S +A++++++
Sbjct: 130 KKELNGIQLEVQATDAGEISLDALKDRVK 158
>02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393
Length = 158
Score = 76.6 bits (180), Expect = 3e-14
Identities = 41/116 (35%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Frame = +3
Query: 141 LXVSDACKTHLRXRSRXDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGGTG 317
+ V D CK + + R++VF I ++ +Q+ V+ +G+ Y+ F L
Sbjct: 27 MAVCDECKLKF-LELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLP---AD 82
Query: 318 ECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 485
ECRY +FDF++ T E +K K+F +SW PDT++V+ KMLY+SS D K+ L
Sbjct: 83 ECRYAVFDFDFV-----TDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKREL 133
>05_01_0103 + 686770-687017,687120-687270
Length = 132
Score = 76.2 bits (179), Expect = 4e-14
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 1/116 (0%)
Frame = +3
Query: 141 LXVSDACKTHLRXRSRXDKKHRYVVFYIRDEKQ-IDVETVGERNAEYEQFLEDLQKGGTG 317
+ V D CK + + +R++++ I ++K+ + VE VGE Y+ F L
Sbjct: 1 MAVDDECKLKF-LELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLP---AN 56
Query: 318 ECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 485
ECRY +FD+++ T E +K K+F ++W PDT++V+ KM+Y+SS D K+ L
Sbjct: 57 ECRYAIFDYDFV-----TEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKREL 107
>03_06_0174 -
32141956-32141985,32143658-32144452,32147645-32147759,
32148134-32148399,32150193-32150213
Length = 408
Score = 76.2 bits (179), Expect = 4e-14
Identities = 38/98 (38%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Frame = +3
Query: 195 KKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDLQKGGTGECRYGLFDFEYTHQCQGT 371
K RYV+F I + +KQ+ VE G Y+ FL L + +CRY L+DF++ T
Sbjct: 31 KAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLPEN---DCRYALYDFDFV-----T 82
Query: 372 SEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 485
E +K K+F ++W P T++++ KMLYS+S D +K+ L
Sbjct: 83 GENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQEL 120
>04_04_0752 -
27791126-27791167,27791792-27791863,27792771-27792855,
27792971-27793236,27794117-27794301,27794925-27795018,
27795193-27795284,27795401-27795539,27796101-27796385
Length = 419
Score = 75.8 bits (178), Expect = 5e-14
Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 1/116 (0%)
Frame = +3
Query: 141 LXVSDACKTHLRXRSRXDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGGTG 317
+ V D CK + + + R++ F I + +Q+ V+ +G+ Y+ F +
Sbjct: 272 MAVGDECKLKFQ-ELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMP---AS 327
Query: 318 ECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 485
ECRY +FDF++ T E +K K+F +SW PDT+KV+ KMLY+SS D K+ L
Sbjct: 328 ECRYAVFDFDFV-----TDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKREL 378
>07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318
Length = 145
Score = 73.3 bits (172), Expect = 2e-13
Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Frame = +3
Query: 141 LXVSDACKTHLRXRSRXDKKHRYVVFYIRDEK-QIDVETVGERNAEYEQFLEDLQKGGTG 317
L V+D CK + + + R++VF I D+ +I VE +G+ YE F L
Sbjct: 14 LAVNDECKFKFQ-ELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATLP---AD 69
Query: 318 ECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 485
ECRY ++D ++ T E +K K+F SW PDTA+ + KMLY+SS D ++ L
Sbjct: 70 ECRYAVYDLDFV-----TDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRREL 120
>12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666
Length = 145
Score = 72.5 bits (170), Expect = 4e-13
Identities = 36/116 (31%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Frame = +3
Query: 141 LXVSDACKTHLRXRSRXDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGGTG 317
+ V+ CK R K HRYV+F I D+ K++ VE G ++ F++ L +
Sbjct: 14 IGVAAECKQTFLELQRK-KSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPES--- 69
Query: 318 ECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 485
+CRY ++DF++ T E +K K+F ++W P ++++ KMLY++S + ++ L
Sbjct: 70 DCRYAIYDFDFV-----TEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRREL 120
>03_06_0479 + 34217170-34217172,34217337-34217786
Length = 150
Score = 71.3 bits (167), Expect = 1e-12
Identities = 42/120 (35%), Positives = 66/120 (55%), Gaps = 7/120 (5%)
Frame = +3
Query: 147 VSDACKTHLRXRSRXDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGGTGEC 323
VS+ CK + R + HR+VVF I D +Q+ V+ VG R+A +++ L G C
Sbjct: 10 VSEECKARFQ-ELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLPADG---C 65
Query: 324 RYGLFDFEYT-HQCQGTSEASK-----KQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 485
RY ++D ++T T+ A + + K+F +SW P A V+ KM+Y+SS + KK L
Sbjct: 66 RYAVYDHDFTVSDATATAAAGEGGEAPRSKIFFVSWSPAAADVRSKMVYASSNEGFKKEL 125
>10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378
Length = 153
Score = 57.2 bits (132), Expect = 2e-08
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Frame = +3
Query: 195 KKHRYVVFYIRDEKQ-IDVETVGERNAEYEQFLEDLQKGGTGECRYGLFDFEYTHQCQGT 371
K HRYV+F I D ++ I VE G Y+ F L +CRY ++D ++ +
Sbjct: 37 KVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLP---ADDCRYAVYDLDFV-----S 88
Query: 372 SEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 485
+ +K K+F +SW P ++++ K +Y+ S + + L
Sbjct: 89 DDNCRKSKIFFISWSPSVSRIRAKTIYAVSRNQFRHEL 126
>07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084
Length = 169
Score = 39.5 bits (88), Expect = 0.004
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +3
Query: 195 KKHRYVVFYIRDEKQ-IDVETVGERNAEYEQFLEDLQKGGTGECRYGLFDFEYTHQCQGT 371
K HRYV+F I D ++ I VE G Y+ F L + Y L DF C
Sbjct: 57 KVHRYVIFKIDDRREEIVVEKTGAPWESYDDFTASLP----ADAVYDL-DFVSDDNC--- 108
Query: 372 SEASKKQKLFLMSWCPDTAKVKKKMLYS 455
+K K+F +SW P + ++ K +Y+
Sbjct: 109 ----RKSKIFFISWSPSLSCIRAKTIYA 132
>03_01_0596 +
4398920-4398982,4399395-4399797,4400234-4400340,
4400458-4400523
Length = 212
Score = 28.3 bits (60), Expect = 9.2
Identities = 23/100 (23%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Frame = +3
Query: 264 RNAEYEQFLEDLQKG-GTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKK 440
RN E + D + G T + R L C+ + ++ ++ D A+V
Sbjct: 112 RNDAAEALVGDHESGIQTIQGRTPLSHGREWEACKEEKAVGESTEVSDQNFADDEAEVDA 171
Query: 441 KMLYSSSFDALKKSLXRSSEVHPSDRPLGSVSGGRRREAP 560
+ + L+ +L R+ +V PSD+ S R++AP
Sbjct: 172 ESSKACKRRKLRSALTRNYQVVPSDKLFASTKADGRKDAP 211
>02_03_0407 -
18675368-18675378,18676047-18676977,18677323-18677376,
18677809-18678039,18678112-18678319,18678405-18678433,
18678638-18678706,18678832-18678893,18679056-18679133,
18679243-18679315,18681135-18681260
Length = 623
Score = 28.3 bits (60), Expect = 9.2
Identities = 22/60 (36%), Positives = 28/60 (46%)
Frame = +3
Query: 453 SSSFDALKKSLXRSSEVHPSDRPLGSVSGGRRREAPRHRSPINSIYTRARDETEPALRHS 632
SSS D LKK L R S P P+ + SGG+ HR Y A +P +RH+
Sbjct: 420 SSSTDDLKK-LKRESWSGPI--PIKAGSGGKPFSQADHRPSPTMAYPGAMPAAKPHVRHA 476
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,085,059
Number of Sequences: 37544
Number of extensions: 379670
Number of successful extensions: 1207
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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