Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP21_F_E19
(897 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_04_0019 + 16500877-16501029,16501184-16501240,16501560-165016... 77 1e-14
03_06_0530 - 34545699-34546013,34546121-34546354,34547006-345470... 77 3e-14
07_03_0529 - 19107949-19108152,19108857-19109147,19109817-191099... 62 4e-10
02_05_0259 - 27226378-27226398,27226643-27226813,27227063-272272... 62 6e-10
04_04_0803 - 28165828-28166136,28166257-28166505,28166628-281668... 59 5e-09
05_06_0083 + 25429958-25429967,25431035-25431144,25431286-254313... 58 7e-09
06_03_1475 - 30391555-30391890,30391982-30392233,30392358-303926... 56 5e-08
07_01_0961 + 8070992-8071015,8071016-8071089,8073051-8073200,807... 44 1e-04
>03_04_0019 +
16500877-16501029,16501184-16501240,16501560-16501668,
16501837-16502021,16502103-16502182,16502869-16503085,
16503394-16503633,16503720-16504028
Length = 449
Score = 77.4 bits (182), Expect = 1e-14
Identities = 36/85 (42%), Positives = 52/85 (61%)
Frame = +1
Query: 475 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYALNALIGLEFPEQSIYLDSLRECYEAYV 654
+S+W I QH+ Y+ P QK II +L+MVP+YA ++I L E S+ D LR CYEA+
Sbjct: 35 VSLWLILQHLRSYSNPEEQKWIIAVLFMVPVYASESIISLWHSEFSLACDILRNCYEAFA 94
Query: 655 IYNFMKYLLNYLNDGHDLXAVLETK 729
+Y F +YL+ L + +LE K
Sbjct: 95 LYAFGRYLVACLGGERQVFRLLENK 119
>03_06_0530 -
34545699-34546013,34546121-34546354,34547006-34547078,
34548226-34548299,34548852-34549004
Length = 282
Score = 76.6 bits (180), Expect = 3e-14
Identities = 32/82 (39%), Positives = 55/82 (67%)
Frame = +1
Query: 475 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYALNALIGLEFPEQSIYLDSLRECYEAYV 654
I++ I +H++HY +P Q+ I+R+++MVP+YA+ + + L P+ SIY +S+RE Y+A+V
Sbjct: 22 IALVHIYRHLLHYAEPIYQRFIVRLIFMVPVYAVMSFLSLILPDNSIYFNSIREIYDAWV 81
Query: 655 IYNFMKYLLNYLNDGHDLXAVL 720
IYNF L ++ + VL
Sbjct: 82 IYNFFSLCLAWVGGPGAVVGVL 103
>07_03_0529 -
19107949-19108152,19108857-19109147,19109817-19109939,
19110019-19110306
Length = 301
Score = 62.5 bits (145), Expect = 4e-10
Identities = 36/100 (36%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Frame = +1
Query: 490 ITQHIVHYTKPSLQKHIIRILWMVPIYALNALIGLEFPEQS----IYLDSLRECYEAYVI 657
++QH+ ++ P QK I+ I+ M P+YA+N+ +GL + S +LD+++ECYEA I
Sbjct: 39 VSQHLFYWKNPKEQKAILIIVLMAPLYAINSFVGLLDIKGSKTFFTFLDAVKECYEALAI 98
Query: 658 YNFMKYLLNYLNDGHDLXAVL-ETKPQV-YHIFPLCCLXP 771
FM + +YLN V E K +V +H FP+ P
Sbjct: 99 AKFMALMYSYLNISISKNIVPDEIKGRVLHHSFPVSLFLP 138
>02_05_0259 -
27226378-27226398,27226643-27226813,27227063-27227284,
27227508-27227668,27227933-27227996,27228002-27228194,
27228499-27228587,27228668-27228852,27229671-27229779,
27229880-27229936,27230023-27230175
Length = 474
Score = 62.1 bits (144), Expect = 6e-10
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 17/120 (14%)
Frame = +1
Query: 475 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYALNALIGLEFPEQSIYLDSLRECYEAYV 654
+S++ I QH+ Y P QK ++ ++ MVP YA+ + + L P+ S+Y LR+ YEA+
Sbjct: 35 LSMYLIFQHLSAYNNPEEQKFVLGVILMVPCYAVESYVSLVNPDTSVYCGILRDAYEAFA 94
Query: 655 IYNFMKYLLNYL----------------NDGHDLXAVLETKPQVYHIFPL-CCLXPWEMG 783
+Y F +Y+ L + G L K ++H FP+ L PW MG
Sbjct: 95 MYCFGRYITACLGGEERTIAFLKREGGGDSGEPLLHGASEKGIIHHHFPVNYILKPWRMG 154
>04_04_0803 -
28165828-28166136,28166257-28166505,28166628-28166889,
28168116-28168204,28168286-28168342,28168443-28168595
Length = 372
Score = 58.8 bits (136), Expect = 5e-09
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 9/103 (8%)
Frame = +1
Query: 475 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYALNALIGLEFPEQSIYLDSLRECYEAYV 654
+SI+ I +H+ Y P QK ++ ++ MVP YA+ + + L P S+Y LR+ YEA+
Sbjct: 35 LSIYLIFEHLSAYNNPEEQKFVLGVILMVPCYAIESYVSLINPNTSVYCGILRDGYEAFA 94
Query: 655 IYNFMKY-----LLNYLNDGHDLXAVLE----TKPQVYHIFPL 756
+Y F +Y +LN+ + L ++E TK ++ HI PL
Sbjct: 95 MYCFGRYPYFAAVLNF-SQYWALYCLVEWYTATKDELAHIKPL 136
>05_06_0083 +
25429958-25429967,25431035-25431144,25431286-25431342,
25431828-25431936,25432329-25432513,25432595-25432683,
25432877-25433132,25433623-25433865,25433955-25434266
Length = 456
Score = 58.4 bits (135), Expect = 7e-09
Identities = 28/94 (29%), Positives = 50/94 (53%)
Frame = +1
Query: 475 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYALNALIGLEFPEQSIYLDSLRECYEAYV 654
+S++ I +H+ Y +P QK +I ++ MVP+YA+ + L + + +R+CYEA+
Sbjct: 24 LSLFLIFEHLCAYHQPEEQKFLIGLILMVPVYAVQSFFSLLNSNVAFICELMRDCYEAFA 83
Query: 655 IYNFMKYLLNYLNDGHDLXAVLETKPQVYHIFPL 756
+Y F +YL+ L +E + Q PL
Sbjct: 84 MYCFERYLIACLGGEESTIRFMEGRFQFSESSPL 117
Score = 33.1 bits (72), Expect = 0.31
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 782 GREFVHNCKHGILQYTLLRPITTVISMIXELNDXY 886
G +F H K GI+QY +L+PI ++++ +L Y
Sbjct: 143 GPDFYHAVKVGIVQYMILKPICAILAIFMQLIGIY 177
>06_03_1475 -
30391555-30391890,30391982-30392233,30392358-30392619,
30393232-30393320,30393408-30393592,30393673-30393781,
30393886-30393942,30394047-30394196
Length = 479
Score = 55.6 bits (128), Expect = 5e-08
Identities = 27/77 (35%), Positives = 46/77 (59%)
Frame = +1
Query: 475 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYALNALIGLEFPEQSIYLDSLRECYEAYV 654
+S++ + H+ Y P QK ++ ++ MVP YA+ + I L P S+ ++ LR+ YEA+
Sbjct: 34 LSLFLLFNHLSAYKNPEEQKFLVGVILMVPCYAVESYISLVNPSISVDIEILRDGYEAFA 93
Query: 655 IYNFMKYLLNYLNDGHD 705
+Y F +YL+ L G D
Sbjct: 94 MYCFGRYLVACLG-GED 109
>07_01_0961 +
8070992-8071015,8071016-8071089,8073051-8073200,
8073307-8073592,8074077-8074220,8074357-8074665
Length = 328
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +1
Query: 556 MVPIYALNALIGLEFPEQSIYLDSLRECYEAYVIYNFMKYLLNYL 690
+V +YA+ + + L P +IY +S+RE Y+A+VIYNF L ++
Sbjct: 6 IVQVYAVMSFLSLVLPGSAIYFNSIREIYDAWVIYNFFSLCLAWV 50
Score = 33.1 bits (72), Expect = 0.31
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 791 FVHNCKHGILQYTLLRPITTVISMIXELNDXY 886
F+ CK G LQ+ +L+PI VI+ I Y
Sbjct: 85 FIRRCKQGCLQFVILKPILVVITFILYAKGKY 116
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,934,143
Number of Sequences: 37544
Number of extensions: 371329
Number of successful extensions: 747
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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