Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_E18
         (893 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        26   0.53 
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        26   0.53 
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        26   0.53 
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   5.0  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   6.6  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   8.7  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 59  FYGLPVGHARRLPQAAKMGAYRY 127
           F+GLPVG    +P +     YRY
Sbjct: 262 FFGLPVGVTAAIPTSENPADYRY 284


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 59  FYGLPVGHARRLPQAAKMGAYRY 127
           F+GLPVG    +P +     YRY
Sbjct: 262 FFGLPVGVTAAIPTSENPADYRY 284


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 59  FYGLPVGHARRLPQAAKMGAYRY 127
           F+GLPVG    +P +     YRY
Sbjct: 262 FFGLPVGVTAAIPTSENPADYRY 284


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +3

Query: 63  TVYLWDTRDVCHRLLRW 113
           T+Y +D RD C    +W
Sbjct: 402 TIYKYDVRDGCRTPFQW 418


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +3

Query: 27  TRESLKIFEFSFTVYLWDTRDVCHRLLRW 113
           +RE    + + F + L   R+ C R ++W
Sbjct: 452 SREGSTTYLWEFLLKLLQDREYCPRYIKW 480


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 90  VCHRLLRWVPTDI 128
           VCH  + W+PT +
Sbjct: 807 VCHNGMNWMPTHL 819


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,666
Number of Sequences: 438
Number of extensions: 4841
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)